RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 P01737 135 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 PRR4Q16378 134 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 Q5BKY6 102 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 SAPCD1Q5SSQ6 148 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 C5orf17Q8NAS9 161 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 HSPB11Q9Y547 144 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 PHLDA3Q9Y5J5 127 aa6.38□□□□□ -1.39
CTDNEP1-202ENST00000570380 GRIFINA4D1Z8 144 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 KRBOX1C9JBD0 128 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 K7EQM0 130 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 M0R381 172 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 HMGB3O15347 200 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 GZMBP10144 247 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 PRR27Q6MZM9 219 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 C20orf203Q8NBC4 194 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 SMIM3Q9BZL3 60 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 GFRA4Q9GZZ7 299 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 WFDC1Q9HC57 220 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
CTDNEP1-202ENST00000570380 M0R036 132 aa6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 GIPP09681 153 aaPredicted RBP6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 PET100P0DJ07 73 aa6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 RPL12P30050 165 aaKnown RBP6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 RAB4BP61018 213 aa6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 CACNG7P62955 275 aa6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 HIGD2BQ4VC39 106 aa6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 DERL1Q9BUN8 251 aa6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 EPDR1Q9UM22 224 aa6.36□□□□□ -1.39
CTDNEP1-202ENST00000570380 IGLV4-60A0A075B6I1 120 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 TRBV25-1A0A075B6N4 114 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 TRAV34A0A0B4J273 112 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 TRBV6-1A0A0K0K1D8 114 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 G3V3Q6 166 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 TPT1P13693 172 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 CRIP1P50238 77 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 SUMO1P63165 101 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 TMEM97Q5BJF2 176 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 ARL2-SNX15V9GYD0 113 aa6.35□□□□□ -1.39
CTDNEP1-202ENST00000570380 A0A1W2PPV4 95 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 ARL14EPLP0DKL9 152 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 RAB2AP61019 212 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 ZNF56Q15929 161 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 IQCJQ1A5X6 159 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 CFAP161Q6P656 301 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 ZFP82Q8N141 532 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 LINC00474Q9P2X8 69 aa6.34□□□□□ -1.39
CTDNEP1-202ENST00000570380 A0A1B0GUV1 79 aa6.33□□□□□ -1.4
CTDNEP1-202ENST00000570380 SMLR1H3BR10 107 aa6.33□□□□□ -1.4
CTDNEP1-202ENST00000570380 Q6ZNX1 250 aa6.33□□□□□ -1.4
CTDNEP1-202ENST00000570380 INO80EQ8NBZ0 244 aaPredicted RBP6.33□□□□□ -1.4
CTDNEP1-202ENST00000570380 SUN5Q8TC36 379 aa6.33□□□□□ -1.4
CTDNEP1-202ENST00000570380 SCGB1C1Q8TD33 95 aa6.33□□□□□ -1.4
CTDNEP1-202ENST00000570380 FXYD6-FXYD2A0A087WZ82 144 aa6.32□□□□□ -1.4
CTDNEP1-202ENST00000570380 TMSB15BA0A087X1C1 80 aa6.32□□□□□ -1.4
CTDNEP1-202ENST00000570380 IGHV1-24A0A0C4DH33 117 aa6.32□□□□□ -1.4
CTDNEP1-202ENST00000570380 GAGE12HA6NDE8 117 aa6.32□□□□□ -1.4
CTDNEP1-202ENST00000570380 SH2D1AO60880 128 aa6.32□□□□□ -1.4
CTDNEP1-202ENST00000570380 AQP10Q96PS8 301 aa6.32□□□□□ -1.4
CTDNEP1-202ENST00000570380 MUC17Q685J3 4493 aa6.32□□□□□ -1.4
CTDNEP1-202ENST00000570380 STAG3L2P0CL84 134 aa6.31□□□□□ -1.4
CTDNEP1-202ENST00000570380 STAG3L3P0CL85 134 aa6.31□□□□□ -1.4
CTDNEP1-202ENST00000570380 GCHFRP30047 84 aa6.31□□□□□ -1.4
CTDNEP1-202ENST00000570380 AKAP14Q86UN6 197 aa6.31□□□□□ -1.4
CTDNEP1-202ENST00000570380 TNFSF18Q9UNG2 199 aa6.31□□□□□ -1.4
CTDNEP1-202ENST00000570380 GVQW2A0A096LPI5 108 aaPredicted RBP6.3□□□□□ -1.4
CTDNEP1-202ENST00000570380 F5H697 171 aa6.3□□□□□ -1.4
CTDNEP1-202ENST00000570380 Q86TA4 180 aa6.3□□□□□ -1.4
CTDNEP1-202ENST00000570380 CDC34P49427 236 aaPredicted RBP6.29□□□□□ -1.4
CTDNEP1-202ENST00000570380 SULT1A2P50226 295 aa6.29□□□□□ -1.4
CTDNEP1-202ENST00000570380 LINC01559Q495D7 138 aa6.29□□□□□ -1.4
CTDNEP1-202ENST00000570380 FAM162BQ5T6X4 162 aa6.29□□□□□ -1.4
CTDNEP1-202ENST00000570380 RPL7L1Q6DKI1 246 aaKnown RBP6.29□□□□□ -1.4
CTDNEP1-202ENST00000570380 COX8CQ7Z4L0 72 aa6.29□□□□□ -1.4
CTDNEP1-202ENST00000570380 OR10AG1Q8NH19 301 aa6.29□□□□□ -1.4
CTDNEP1-202ENST00000570380 A0A1W2PNN7 141 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 ARPC5O15511 151 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 MT-ND6P03923 174 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 ATP6V0CP27449 155 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 ZNF674Q2M3X9 581 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 C1orf137Q5JT78 98 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 FER1L6-AS1Q8NA97 138 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 DIRC1Q969H9 104 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 RAB24Q969Q5 203 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 LINC00526Q96FQ7 95 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 TMEM243Q9BU79 118 aa6.28□□□□□ -1.4
CTDNEP1-202ENST00000570380 IGLV1-50A0A075B6I6 118 aa6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 IGKV3OR2-268A0A0C4DH90 116 aa6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 A0A1B0GVG6 124 aa6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 CHCHD10Q8WYQ3 142 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 ZNF471Q9BX82 626 aaPredicted RBP6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 CYTL1Q9NRR1 136 aa6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 TMEM167BQ9NRX6 74 aa6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 PKIGQ9Y2B9 76 aa6.27□□□□□ -1.41
CTDNEP1-202ENST00000570380 MUC21A0A140T8X8 626 aa6.26□□□□□ -1.41
CTDNEP1-202ENST00000570380 A0A1W2PRE2 83 aa6.26□□□□□ -1.41
CTDNEP1-202ENST00000570380 PEX7O00628 323 aa6.26□□□□□ -1.41
CTDNEP1-202ENST00000570380 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
CTDNEP1-202ENST00000570380 AMTP48728 403 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms