RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 NDUFV3P56181 108 aaKnown RBP9.62□□□□□ -0.87
COMMD4-209ENST00000564068 CFAP126Q5VTH2 177 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 IGF2-ASQ6U949 168 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 UNQ9165/PRO28630Q6UXU0 137 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 PIFOQ8TCI5 191 aa9.62□□□□□ -0.87
COMMD4-209ENST00000564068 USP9XQ93008 2570 aaPredicted RBP9.62□□□□□ -0.87
COMMD4-209ENST00000564068 ZNRF2Q8NHG8 242 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 Q9H8V8 135 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 XCL2Q9UBD3 114 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 RHOHQ15669 191 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 C16orf54Q6UWD8 224 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 Q6ZQT7 251 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 IGHG4P01861 327 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
COMMD4-209ENST00000564068 FSTL3O95633 263 aa9.6□□□□□ -0.87
COMMD4-209ENST00000564068 HOXD3P31249 432 aaPredicted RBP9.6□□□□□ -0.87
COMMD4-209ENST00000564068 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
COMMD4-209ENST00000564068 CEMP1Q6PRD7 247 aaPredicted RBP9.6□□□□□ -0.87
COMMD4-209ENST00000564068 TIMM17AQ99595 171 aa9.6□□□□□ -0.87
COMMD4-209ENST00000564068 IGHV1-69P01742 117 aa9.6□□□□□ -0.87
COMMD4-209ENST00000564068 TMEM86BQ8N661 226 aa9.6□□□□□ -0.87
COMMD4-209ENST00000564068 TRBV7-3A0A075B6L6 115 aa9.59□□□□□ -0.87
COMMD4-209ENST00000564068 TINCRA0A1B0GVN0 87 aa9.59□□□□□ -0.87
COMMD4-209ENST00000564068 TRBV12-3P01733 135 aa9.59□□□□□ -0.87
COMMD4-209ENST00000564068 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
COMMD4-209ENST00000564068 SLC25A29Q8N8R3 303 aa9.59□□□□□ -0.87
COMMD4-209ENST00000564068 NRACQ8N912 160 aa9.59□□□□□ -0.87
COMMD4-209ENST00000564068 BLCAPP62952 87 aa9.59□□□□□ -0.87
COMMD4-209ENST00000564068 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
COMMD4-209ENST00000564068 RHODO00212 210 aa9.58□□□□□ -0.88
COMMD4-209ENST00000564068 MDFICQ9P1T7 246 aa9.58□□□□□ -0.88
COMMD4-209ENST00000564068 ZFP36P26651 326 aaKnown RBP9.58□□□□□ -0.88
COMMD4-209ENST00000564068 CCDC140Q96MF4 163 aa9.58□□□□□ -0.88
COMMD4-209ENST00000564068 EXPH5Q8NEV8 1989 aa9.58□□□□□ -0.88
COMMD4-209ENST00000564068 IGHV3-30-3P0DP02 117 aa9.58□□□□□ -0.88
COMMD4-209ENST00000564068 AJUBAQ96IF1 538 aa9.58□□□□□ -0.88
COMMD4-209ENST00000564068 TNRC6BQ9UPQ9 1833 aaKnown RBP9.58□□□□□ -0.88
COMMD4-209ENST00000564068 Q6ZS46 218 aa9.58□□□□□ -0.88
COMMD4-209ENST00000564068 TRAV4A0A0B4J268 109 aa9.57□□□□□ -0.88
COMMD4-209ENST00000564068 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
COMMD4-209ENST00000564068 VCANP13611 3396 aa9.57□□□□□ -0.88
COMMD4-209ENST00000564068 CFHR3Q02985 330 aa9.57□□□□□ -0.88
COMMD4-209ENST00000564068 MRPL23Q16540 153 aaKnown RBP9.57□□□□□ -0.88
COMMD4-209ENST00000564068 MTORP42345 2549 aa9.56□□□□□ -0.88
COMMD4-209ENST00000564068 LGALS9O00182 355 aa9.56□□□□□ -0.88
COMMD4-209ENST00000564068 HECTD1Q9ULT8 2610 aa9.56□□□□□ -0.88
COMMD4-209ENST00000564068 SOCS3O14543 225 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 C20orf203Q8NBC4 194 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 ABCA12Q86UK0 2595 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 IGHV3-33P01772 117 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 Q8NA96 180 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 LAMTOR3Q9UHA4 124 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 MAPK1IP1LQ8NDC0 245 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 IGKV3D-7A0A0C4DH55 119 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
COMMD4-209ENST00000564068 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 NXPH4O95158 308 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 INSP01308 110 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 TRACP01848 142 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 MALP21145 153 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 PRORYQ9H606 182 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 H3BT86 120 aa9.54□□□□□ -0.88
COMMD4-209ENST00000564068 PRR9Q5T870 116 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 CCDC179H3BU77 68 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 MRPS12O15235 138 aaKnown RBP9.53□□□□□ -0.88
COMMD4-209ENST00000564068 P0DMU3 169 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 FAM231AP0DMU4 169 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 FAM231CP0DMU5 169 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 ZFAND2AQ8N6M9 145 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 C5orf56Q8N8D9 126 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 TRIAP1O43715 76 aa9.53□□□□□ -0.88
COMMD4-209ENST00000564068 B4DSR2 109 aa9.52□□□□□ -0.88
COMMD4-209ENST00000564068 IGHV3-30P01768 117 aa9.52□□□□□ -0.88
COMMD4-209ENST00000564068 IGHV3-30-5P0DP03 117 aa9.52□□□□□ -0.88
COMMD4-209ENST00000564068 HERVK_113P63121 156 aa9.52□□□□□ -0.88
COMMD4-209ENST00000564068 NFE4Q86UQ8 179 aa9.52□□□□□ -0.88
COMMD4-209ENST00000564068 LY6LH3BQJ8 138 aa9.52□□□□□ -0.89
COMMD4-209ENST00000564068 HTN3P15516 51 aa9.52□□□□□ -0.89
COMMD4-209ENST00000564068 ZMAT4Q9H898 229 aa9.52□□□□□ -0.89
COMMD4-209ENST00000564068 RPL35AP18077 110 aaKnown RBP9.52□□□□□ -0.89
COMMD4-209ENST00000564068 CNFNQ9BYD5 112 aa9.52□□□□□ -0.89
COMMD4-209ENST00000564068 OVOL2Q9BRP0 275 aa9.51□□□□□ -0.89
COMMD4-209ENST00000564068 COL5A1P20908 1838 aaPredicted RBP9.51□□□□□ -0.89
COMMD4-209ENST00000564068 ZNF22P17026 224 aaPredicted RBP9.51□□□□□ -0.89
COMMD4-209ENST00000564068 ACYP1P07311 99 aa9.51□□□□□ -0.89
COMMD4-209ENST00000564068 TMEM126AQ9H061 195 aa9.51□□□□□ -0.89
COMMD4-209ENST00000564068 A0A0B4J2C4 111 aa9.51□□□□□ -0.89
COMMD4-209ENST00000564068 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
COMMD4-209ENST00000564068 A8MZ25 164 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 CRIP2P52943 208 aaPredicted RBP9.5□□□□□ -0.89
COMMD4-209ENST00000564068 MSMBP08118 114 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 FN1P02751 2386 aaKnown RBP9.5□□□□□ -0.89
COMMD4-209ENST00000564068 ZNF292O60281 2723 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 TRAV13-2A0A0B4J235 113 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 A0A1B0GX51 115 aa9.5□□□□□ -0.89
COMMD4-209ENST00000564068 DEFB130BP0DP73 79 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms