RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 SCP2D1Q9UJQ7 156 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 V9GYV3 84 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 WNK2Q9Y3S1 2297 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 VWFP04275 2813 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 PKD1L1Q8TDX9 2849 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 PRRC2CQ9Y520 2896 aaKnown RBP-0.25□□□□□ -2.45
CHD9-207ENST00000562806 COL6A3P12111 3177 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 HECTD4Q9Y4D8 3996 aa-0.25□□□□□ -2.45
CHD9-207ENST00000562806 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.25□□□□□ -2.45
CHD9-207ENST00000562806 LAMA2P24043 3122 aaKnown RBP-0.26□□□□□ -2.45
CHD9-207ENST00000562806 CHD6Q8TD26 2715 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 ADGRB1O14514 1584 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 TRAV12-3A0A0B4J271 114 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 CLPSL1A2RUU4 121 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 TMEM14DPA8MWL7 114 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 G3V318 75 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 M0R129 80 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 M0R2P5 195 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 CFDP00746 253 aaPredicted RBP-0.26□□□□□ -2.45
CHD9-207ENST00000562806 NEFHP12036 1026 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 GCHFRP30047 84 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 INSL4Q14641 139 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 SPCS2Q15005 226 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 LINC01545Q5VT33 79 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 MIC13Q5XKP0 118 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 SELENOSQ9BQE4 189 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 AKAP13Q12802 2813 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 FLGP20930 4061 aaPredicted RBP-0.26□□□□□ -2.45
CHD9-207ENST00000562806 F8P00451 2351 aa-0.26□□□□□ -2.45
CHD9-207ENST00000562806 FAT2Q9NYQ8 4349 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 PARP14Q460N5 1801 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 WDR87Q6ZQQ6 2873 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 MXRA5Q9NR99 2828 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 BIVM-ERCC5R4GMW8 1640 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 FAT3Q8TDW7 4589 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 MYO7AQ13402 2215 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 TRBV20-1A0A075B6N2 111 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 TRGV1A0A0A0MS02 117 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 FAM236AA0A1B0GUQ0 79 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 FAM236BA0A1B0GV22 79 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 PITX3O75364 302 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 DBIP07108 87 aaKnown RBP-0.27□□□□□ -2.45
CHD9-207ENST00000562806 B2MP61769 119 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 CCDC153Q494R4 210 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 MORN2Q502X0 79 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 UBE2DNLQ8IWF7 75 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 BATF3Q9NR55 127 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 NDUFA12Q9UI09 145 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 DSPP15924 2871 aaKnown RBP-0.27□□□□□ -2.45
CHD9-207ENST00000562806 USP9YO00507 2555 aaPredicted RBP-0.27□□□□□ -2.45
CHD9-207ENST00000562806 ACANP16112 2415 aa-0.27□□□□□ -2.45
CHD9-207ENST00000562806 ZMYM4Q5VZL5 1548 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 MAP1BP46821 2468 aaKnown RBP-0.28□□□□□ -2.45
CHD9-207ENST00000562806 IBTKQ9P2D0 1353 aaPredicted RBP-0.28□□□□□ -2.45
CHD9-207ENST00000562806 TACC2O95359 2948 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 SSBP3-AS1Q7Z2R9 100 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 TAC4Q86UU9 113 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 C10orf82Q8WW14 230 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 AIF1LQ9BQI0 150 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 CYP4F30PQ9H0H9 118 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 MRPL40Q9NQ50 206 aaKnown RBP-0.28□□□□□ -2.45
CHD9-207ENST00000562806 IFT172Q9UG01 1749 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 MUC17Q685J3 4493 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 MYO18BQ8IUG5 2567 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 DNAH6Q9C0G6 4158 aa-0.28□□□□□ -2.45
CHD9-207ENST00000562806 PLECQ15149 4684 aaKnown RBP-0.29□□□□□ -2.46
CHD9-207ENST00000562806 CADP27708 2225 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 FLNBO75369 2602 aaKnown RBP-0.29□□□□□ -2.46
CHD9-207ENST00000562806 HECTD1Q9ULT8 2610 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 DNAH2Q9P225 4427 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 A0A0D9SFI3 127 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 ZNF815PA8K554 130 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 IGLC6P0CF74 106 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 UBE2D1P51668 147 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 NCS1P62166 190 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 KRTAP19-8Q3LI54 63 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 VSTM2AQ8TAG5 236 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 LAMC1P11047 1609 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 NHSL1Q5SYE7 1610 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 SVEP1Q4LDE5 3571 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 NCOR1O75376 2440 aa-0.29□□□□□ -2.46
CHD9-207ENST00000562806 PRG4Q92954 1404 aaPredicted RBP-0.3□□□□□ -2.46
CHD9-207ENST00000562806 ANKRD11Q6UB99 2663 aaPredicted RBP-0.3□□□□□ -2.46
CHD9-207ENST00000562806 PTPRQQ9UMZ3 2332 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 MYH13Q9UKX3 1938 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 PIRTP0C851 137 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 EDDM3BP56851 147 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 HIST1H1AQ02539 215 aaPredicted RBP-0.3□□□□□ -2.46
CHD9-207ENST00000562806 SPANXN1Q5VSR9 72 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 MMGT1Q8N4V1 131 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 WFDC6Q9BQY6 131 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 CNFNQ9BYD5 112 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 SAR1AQ9NR31 198 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 WNK1Q9H4A3 2382 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 ATRQ13535 2644 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 CSMD3Q7Z407 3707 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 ALMS1Q8TCU4 4167 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 AHCTF1Q8WYP5 2266 aa-0.3□□□□□ -2.46
CHD9-207ENST00000562806 OVOS2A0A0J9YW53 1432 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms