RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PYGO1Q9Y3Y4 419 aa4.42□□□□□ -1.7
SNRPA1-209ENST00000560307 INTS1Q8N201 2190 aaKnown RBP4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 FAM236AA0A1B0GUQ0 79 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 FAM236BA0A1B0GV22 79 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 ATOX1O00244 68 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 NPFFO15130 113 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 RNASE3P12724 160 aaKnown RBP4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 EMP1P54849 157 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 BSPH1Q075Z2 132 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 PRR9Q5T870 116 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 ATP1A1-AS1Q5TC04 95 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 FAM222AQ5U5X8 452 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 Q6ZSV7 163 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 C5orf38Q86SI9 138 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 DAND5Q8N907 189 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 LITAFQ99732 161 aa4.41□□□□□ -1.7
SNRPA1-209ENST00000560307 LAMA2P24043 3122 aaKnown RBP4.4□□□□□ -1.7
SNRPA1-209ENST00000560307 IGHV7-81A0A0B4J1V7 117 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 SOCS3O14543 225 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 TRACP01848 142 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 INAFM2P0DMQ5 153 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 UBE2E1P51965 193 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 PROK1P58294 105 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 TMEM258P61165 79 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 HIST1H4AP62805 103 aaKnown RBP4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 MRPS36P82909 103 aaKnown RBP4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 ZNF415Q09FC8 603 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 TMEM61Q8N0U2 210 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 DCANP1Q8TF63 244 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 CHCHD5Q9BSY4 110 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 S4R3C0 116 aa4.4□□□□□ -1.71
SNRPA1-209ENST00000560307 DNAH14Q0VDD8 3507 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 IGLV4-3A0A075B6K6 122 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 IGHV1-58A0A0C4DH39 117 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 KRTAP29-1A8MX34 341 aaPredicted RBP4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 IGHV3-23P01764 117 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 LINC00694P0DN24 101 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 PRB4P10163 310 aaPredicted RBP4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 GNLYP22749 145 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 ID1P41134 155 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 HERVK_113P63121 156 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 C15orf32Q32M92 178 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 Q8N9W7 124 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 C20orf203Q8NBC4 194 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 OVOL2Q9BRP0 275 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 TIMM21Q9BVV7 248 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 PLXNB1O43157 2135 aa4.39□□□□□ -1.71
SNRPA1-209ENST00000560307 TRAV25A0A0B4J276 109 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 KLLNB2CW77 178 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 E7EQL1 145 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 H7C2G1 150 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 I3L3M4 83 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 NDUFA4O00483 81 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 COX7A2LO14548 114 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 RPL39P62891 51 aaKnown RBP4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 C2orf48Q96LS8 159 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 C9orf85Q96MD7 179 aa4.38□□□□□ -1.71
SNRPA1-209ENST00000560307 NDUFC2-KCTD14E9PQ53 114 aa4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 H3BUA1 57 aa4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 GAGE2AQ6NT46 116 aa4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 VMO1Q7Z5L0 202 aa4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 DUX3Q96PT4 197 aa4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 PRORYQ9H606 182 aa4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 NDUFA12Q9UI09 145 aa4.37□□□□□ -1.71
SNRPA1-209ENST00000560307 ZGRF1Q86YA3 2104 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 A0A0J9YXV3 536 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 M0QY20 66 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 NDUFA1O15239 70 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 CIRBPQ14011 172 aaKnown RBP4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 Q6JHZ5 121 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 CLEC19AQ6UXS0 136 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 FAM19A5Q7Z5A7 132 aaPredicted RBP4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 VSIG2Q96IQ7 327 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 ARRDC1-AS1Q9H2J1 176 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 LINC00527Q9UJ94 153 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 ARFGEF3Q5TH69 2177 aa4.36□□□□□ -1.71
SNRPA1-209ENST00000560307 IGLV5-45A0A087WSX0 123 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 IGHV4-28A0A0C4DH34 117 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 ATP6V0E1O15342 81 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 GNRH2O43555 120 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 ODF3L2Q3SX64 289 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 MRAPQ8TCY5 172 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 SMCR5Q8TEV8 140 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 CLEC2BQ92478 149 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 RANBP2P49792 3224 aaKnown RBP4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 SZT2Q5T011 3432 aa4.35□□□□□ -1.71
SNRPA1-209ENST00000560307 TRAV8-3A0A0A6YYJ7 113 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 IGHV3-16A0A0C4DH30 117 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 IGHV3-66A0A0C4DH42 116 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 CD28P10747 220 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 ATP5J2P56134 94 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 ECSCRQ19T08 205 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms