RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 TIRAPP58753 221 aa15.4■□□□□ 0.06
PABPN1-206ENST00000556809 RPL36AP83881 106 aaKnown RBP15.4■□□□□ 0.06
PABPN1-206ENST00000556809 RPL36ALQ969Q0 106 aaKnown RBP15.4■□□□□ 0.06
PABPN1-206ENST00000556809 SEC11CQ9BY50 192 aa15.4■□□□□ 0.06
PABPN1-206ENST00000556809 SUMO4Q6EEV6 95 aa15.39■□□□□ 0.05
PABPN1-206ENST00000556809 TRBV7-3A0A075B6L6 115 aa15.38■□□□□ 0.05
PABPN1-206ENST00000556809 MT-ND4LP03901 98 aa15.38■□□□□ 0.05
PABPN1-206ENST00000556809 RIGQ13278 110 aa15.38■□□□□ 0.05
PABPN1-206ENST00000556809 NEXN-AS1Q8NBZ9 246 aa15.38■□□□□ 0.05
PABPN1-206ENST00000556809 GTSF1LQ9H1H1 148 aa15.38■□□□□ 0.05
PABPN1-206ENST00000556809 H7C1H1 209 aa15.37■□□□□ 0.05
PABPN1-206ENST00000556809 M0QY20 66 aa15.37■□□□□ 0.05
PABPN1-206ENST00000556809 C6orf223Q8N319 242 aa15.37■□□□□ 0.05
PABPN1-206ENST00000556809 ANAPC16Q96DE5 110 aa15.37■□□□□ 0.05
PABPN1-206ENST00000556809 UBE2D3P61077 147 aa15.36■□□□□ 0.05
PABPN1-206ENST00000556809 UBE2D2P62837 147 aa15.36■□□□□ 0.05
PABPN1-206ENST00000556809 TTC32Q5I0X7 151 aa15.35■□□□□ 0.05
PABPN1-206ENST00000556809 SIVA1O15304 175 aa15.34■□□□□ 0.05
PABPN1-206ENST00000556809 TMEM191AQ9H0A3 160 aa15.34■□□□□ 0.05
PABPN1-206ENST00000556809 C10orf91Q5T1B1 145 aa15.33■□□□□ 0.04
PABPN1-206ENST00000556809 LELP1Q5T871 98 aa15.33■□□□□ 0.04
PABPN1-206ENST00000556809 RASL11AQ6T310 242 aa15.33■□□□□ 0.04
PABPN1-206ENST00000556809 WFDC10BQ8IUB3 73 aa15.33■□□□□ 0.04
PABPN1-206ENST00000556809 DNAJC30Q96LL9 226 aa15.33■□□□□ 0.04
PABPN1-206ENST00000556809 TRAV8-6A0A0B4J262 113 aa15.31■□□□□ 0.04
PABPN1-206ENST00000556809 A0A1B0GW15 77 aa15.31■□□□□ 0.04
PABPN1-206ENST00000556809 OR10J3Q5JRS4 329 aa15.31■□□□□ 0.04
PABPN1-206ENST00000556809 GATD1Q8NB37 220 aa15.31■□□□□ 0.04
PABPN1-206ENST00000556809 CARHSP1Q9Y2V2 147 aaKnown RBP15.31■□□□□ 0.04
PABPN1-206ENST00000556809 TNFRSF18Q9Y5U5 241 aa15.31■□□□□ 0.04
PABPN1-206ENST00000556809 PKHD1P08F94 4074 aa15.31■□□□□ 0.04
PABPN1-206ENST00000556809 A0A087WWC5 75 aa15.3■□□□□ 0.04
PABPN1-206ENST00000556809 TRAV26-2A0A0B4J265 109 aa15.3■□□□□ 0.04
PABPN1-206ENST00000556809 BTF3P20290 206 aaKnown RBP15.3■□□□□ 0.04
PABPN1-206ENST00000556809 MRPL54Q6P161 138 aaKnown RBP15.3■□□□□ 0.04
PABPN1-206ENST00000556809 NIT2Q9NQR4 276 aa15.3■□□□□ 0.04
PABPN1-206ENST00000556809 CAMPP49913 170 aa15.29■□□□□ 0.04
PABPN1-206ENST00000556809 TNP2Q05952 138 aa15.29■□□□□ 0.04
PABPN1-206ENST00000556809 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.29■□□□□ 0.04
PABPN1-206ENST00000556809 DNAH11Q96DT5 4516 aa15.29■□□□□ 0.04
PABPN1-206ENST00000556809 IGHV3-38A0A0C4DH36 116 aa15.28■□□□□ 0.04
PABPN1-206ENST00000556809 DAZ4Q86SG3 579 aaKnown RBP15.28■□□□□ 0.04
PABPN1-206ENST00000556809 AMN1Q8IY45 258 aa15.28■□□□□ 0.04
PABPN1-206ENST00000556809 FRZBQ92765 325 aa15.28■□□□□ 0.04
PABPN1-206ENST00000556809 RNF185Q96GF1 192 aa15.28■□□□□ 0.04
PABPN1-206ENST00000556809 CTDSP1Q9GZU7 261 aa15.28■□□□□ 0.04
PABPN1-206ENST00000556809 DAZ3Q9NR90 486 aaKnown RBP15.28■□□□□ 0.04
PABPN1-206ENST00000556809 A0A1B0GXF2 115 aa15.27■□□□□ 0.04
PABPN1-206ENST00000556809 S100A8P05109 93 aa15.27■□□□□ 0.04
PABPN1-206ENST00000556809 DNAH10OSP0CZ25 163 aa15.27■□□□□ 0.04
PABPN1-206ENST00000556809 RAB4AP20338 218 aa15.27■□□□□ 0.04
PABPN1-206ENST00000556809 HBBP68871 147 aa15.27■□□□□ 0.04
PABPN1-206ENST00000556809 DYNC1H1Q14204 4646 aaKnown RBP15.27■□□□□ 0.03
PABPN1-206ENST00000556809 ATP5L2Q7Z4Y8 100 aa15.26■□□□□ 0.03
PABPN1-206ENST00000556809 RPL39LQ96EH5 51 aaKnown RBP15.25■□□□□ 0.03
PABPN1-206ENST00000556809 MRAP2Q96G30 205 aa15.25■□□□□ 0.03
PABPN1-206ENST00000556809 IMMP2LQ96T52 175 aa15.25■□□□□ 0.03
PABPN1-206ENST00000556809 CLRN3Q8NCR9 226 aa15.24■□□□□ 0.03
PABPN1-206ENST00000556809 TRAV9-2A0A087WT02 112 aa15.23■□□□□ 0.03
PABPN1-206ENST00000556809 TRBV6-8A0A0A6YYG3 113 aa15.23■□□□□ 0.03
PABPN1-206ENST00000556809 C7orf77A4D0Y5 90 aa15.23■□□□□ 0.03
PABPN1-206ENST00000556809 RHEBQ15382 184 aa15.23■□□□□ 0.03
PABPN1-206ENST00000556809 TMEM97Q5BJF2 176 aa15.23■□□□□ 0.03
PABPN1-206ENST00000556809 LINC01556Q5JQF7 62 aa15.23■□□□□ 0.03
PABPN1-206ENST00000556809 FAM104BQ5XKR9 115 aa15.23■□□□□ 0.03
PABPN1-206ENST00000556809 Q6ZRN7 208 aaPredicted RBP15.23■□□□□ 0.03
PABPN1-206ENST00000556809 K7EP13 123 aa15.22■□□□□ 0.03
PABPN1-206ENST00000556809 GAS8-AS1O95177 125 aa15.22■□□□□ 0.03
PABPN1-206ENST00000556809 NDUFA5Q16718 116 aa15.22■□□□□ 0.03
PABPN1-206ENST00000556809 BTF3L4Q96K17 158 aa15.22■□□□□ 0.03
PABPN1-206ENST00000556809 APOC3P02656 99 aa15.21■□□□□ 0.03
PABPN1-206ENST00000556809 KCNIP4Q6PIL6 250 aa15.21■□□□□ 0.03
PABPN1-206ENST00000556809 NTM-AS1Q6ZSK4 140 aa15.21■□□□□ 0.03
PABPN1-206ENST00000556809 TMEM242Q9NWH2 141 aa15.21■□□□□ 0.03
PABPN1-206ENST00000556809 TRBV6-5A0A0K0K1A5 114 aa15.2■□□□□ 0.02
PABPN1-206ENST00000556809 MRPL51Q4U2R6 128 aaKnown RBP15.2■□□□□ 0.02
PABPN1-206ENST00000556809 SMKR1H3BMG3 65 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 NCR2O95944 276 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 IGHV3-30P01768 117 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 IGHV3-33P01772 117 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 IGHV3-30-3P0DP02 117 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 IGHV3-30-5P0DP03 117 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 RPS10P46783 165 aaKnown RBP15.19■□□□□ 0.02
PABPN1-206ENST00000556809 C10orf126Q8N4M7 172 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 RPS10P5Q9NQ39 176 aa15.19■□□□□ 0.02
PABPN1-206ENST00000556809 NIT1Q86X76 327 aa15.18■□□□□ 0.02
PABPN1-206ENST00000556809 SVBPQ8N300 66 aa15.18■□□□□ 0.02
PABPN1-206ENST00000556809 TRBV25-1A0A075B6N4 114 aa15.17■□□□□ 0.02
PABPN1-206ENST00000556809 SDHAF1A6NFY7 115 aa15.17■□□□□ 0.02
PABPN1-206ENST00000556809 SLC7A5P1Q8MH63 180 aa15.17■□□□□ 0.02
PABPN1-206ENST00000556809 Q8N3U1 123 aa15.17■□□□□ 0.02
PABPN1-206ENST00000556809 ST20Q9HBF5 79 aa15.17■□□□□ 0.02
PABPN1-206ENST00000556809 URGCP-MRPS24S4R325 110 aa15.17■□□□□ 0.02
PABPN1-206ENST00000556809 TRAV9-1A0A075B6T8 112 aa15.16■□□□□ 0.02
PABPN1-206ENST00000556809 IGHV1-24A0A0C4DH33 117 aa15.16■□□□□ 0.02
PABPN1-206ENST00000556809 SNAPINO95295 136 aa15.16■□□□□ 0.02
PABPN1-206ENST00000556809 PPP1R17O96001 155 aa15.16■□□□□ 0.02
PABPN1-206ENST00000556809 S100PP25815 95 aa15.16■□□□□ 0.02
PABPN1-206ENST00000556809 COTL1Q14019 142 aa15.16■□□□□ 0.02
PABPN1-206ENST00000556809 IQCJQ1A5X6 159 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms