RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 MED28Q9H204 178 aa9.89□□□□□ -0.83
SUPT16H-205ENST00000556217 TRBV25-1A0A075B6N4 114 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 PANO1I0J062 215 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 AKR1C3P42330 323 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 FHITP49789 147 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 CST9LP1Q5W188 147 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 OR10AG1Q8NH19 301 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 STOML3Q8TAV4 291 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 DPH3Q96FX2 82 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 VAX2Q9UIW0 290 aa9.88□□□□□ -0.83
SUPT16H-205ENST00000556217 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 CXCL1P09341 107 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 GAGE6Q13070 117 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 SPANXN1Q5VSR9 72 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 NTM-AS1Q6ZSK4 140 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
SUPT16H-205ENST00000556217 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
SUPT16H-205ENST00000556217 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.86□□□□□ -0.83
SUPT16H-205ENST00000556217 hDV102S1A0JD36 115 aa9.86□□□□□ -0.83
SUPT16H-205ENST00000556217 CIRBPQ14011 172 aaKnown RBP9.86□□□□□ -0.83
SUPT16H-205ENST00000556217 DPH3P1Q9H4G8 78 aa9.86□□□□□ -0.83
SUPT16H-205ENST00000556217 AP5S1Q9NUS5 200 aa9.86□□□□□ -0.83
SUPT16H-205ENST00000556217 TNXBP22105 4242 aa9.86□□□□□ -0.83
SUPT16H-205ENST00000556217 S100A9P06702 114 aaKnown RBP9.85□□□□□ -0.83
SUPT16H-205ENST00000556217 GIPP09681 153 aaPredicted RBP9.85□□□□□ -0.83
SUPT16H-205ENST00000556217 REG3AQ06141 175 aa9.85□□□□□ -0.83
SUPT16H-205ENST00000556217 SSBP4Q9BWG4 385 aaPredicted RBP9.85□□□□□ -0.83
SUPT16H-205ENST00000556217 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 FXYD6-FXYD2A0A087WZ82 144 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 TRAV8-4A0A0B4J246 113 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 IGHV1-24A0A0C4DH33 117 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 SNAI2O43623 268 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 P01737 135 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 OR5AL1P0C617 328 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 IQCJQ1A5X6 159 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 Q5BKY6 102 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 AP1S3Q96PC3 154 aa9.84□□□□□ -0.83
SUPT16H-205ENST00000556217 MUC21A0A0G2JKD1 596 aa9.83□□□□□ -0.84
SUPT16H-205ENST00000556217 MUC21A0A140T8X8 626 aa9.83□□□□□ -0.84
SUPT16H-205ENST00000556217 A0A087WYN8 130 aa9.82□□□□□ -0.84
SUPT16H-205ENST00000556217 H7C1H1 209 aa9.82□□□□□ -0.84
SUPT16H-205ENST00000556217 GZMBP10144 247 aa9.82□□□□□ -0.84
SUPT16H-205ENST00000556217 SSTP61278 116 aa9.82□□□□□ -0.84
SUPT16H-205ENST00000556217 C7orf33Q8WU49 177 aa9.82□□□□□ -0.84
SUPT16H-205ENST00000556217 PAGE4O60829 102 aa9.81□□□□□ -0.84
SUPT16H-205ENST00000556217 BAGE2Q86Y30 109 aa9.81□□□□□ -0.84
SUPT16H-205ENST00000556217 SPACA4Q8TDM5 124 aa9.81□□□□□ -0.84
SUPT16H-205ENST00000556217 KIF25-AS1Q9Y6Z4 181 aa9.81□□□□□ -0.84
SUPT16H-205ENST00000556217 PFDN1O60925 122 aa9.8□□□□□ -0.84
SUPT16H-205ENST00000556217 MLST8Q9BVC4 326 aa9.8□□□□□ -0.84
SUPT16H-205ENST00000556217 A0A1B0GUV1 79 aa9.79□□□□□ -0.84
SUPT16H-205ENST00000556217 CHTF8P0CG12 524 aa9.79□□□□□ -0.84
SUPT16H-205ENST00000556217 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
SUPT16H-205ENST00000556217 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
SUPT16H-205ENST00000556217 TMEM243Q9BU79 118 aa9.79□□□□□ -0.84
SUPT16H-205ENST00000556217 SCO2A0A1W2PP80 73 aa9.78□□□□□ -0.84
SUPT16H-205ENST00000556217 M0QY20 66 aa9.78□□□□□ -0.84
SUPT16H-205ENST00000556217 MGPP08493 103 aa9.78□□□□□ -0.84
SUPT16H-205ENST00000556217 RAB5CP51148 216 aa9.78□□□□□ -0.84
SUPT16H-205ENST00000556217 PLAC8Q9NZF1 115 aa9.78□□□□□ -0.84
SUPT16H-205ENST00000556217 PHOX2AO14813 284 aa9.77□□□□□ -0.85
SUPT16H-205ENST00000556217 UBE2L6O14933 153 aa9.77□□□□□ -0.85
SUPT16H-205ENST00000556217 SLPIP03973 132 aa9.77□□□□□ -0.85
SUPT16H-205ENST00000556217 CFAP161Q6P656 301 aa9.77□□□□□ -0.85
SUPT16H-205ENST00000556217 SFT2D1Q8WV19 159 aa9.77□□□□□ -0.85
SUPT16H-205ENST00000556217 IGLV4-60A0A075B6I1 120 aa9.76□□□□□ -0.85
SUPT16H-205ENST00000556217 SULT1A2P50226 295 aa9.76□□□□□ -0.85
SUPT16H-205ENST00000556217 TPPP3Q9BW30 176 aa9.76□□□□□ -0.85
SUPT16H-205ENST00000556217 CYTL1Q9NRR1 136 aa9.76□□□□□ -0.85
SUPT16H-205ENST00000556217 ARPC5O15511 151 aa9.75□□□□□ -0.85
SUPT16H-205ENST00000556217 NKX2-5P52952 324 aaPredicted RBP9.75□□□□□ -0.85
SUPT16H-205ENST00000556217 SUMO4Q6EEV6 95 aa9.75□□□□□ -0.85
SUPT16H-205ENST00000556217 TMUB2Q71RG4 321 aa9.75□□□□□ -0.85
SUPT16H-205ENST00000556217 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
SUPT16H-205ENST00000556217 PGLYRP4Q96LB8 373 aa9.75□□□□□ -0.85
SUPT16H-205ENST00000556217 LINC01600Q96MT4 127 aa9.75□□□□□ -0.85
SUPT16H-205ENST00000556217 RPS10P46783 165 aaKnown RBP9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 RPS20P60866 119 aaKnown RBP9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 CACNG7P62955 275 aa9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 RASL11AQ6T310 242 aa9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 FER1L6-AS1Q8NA97 138 aa9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 FAM213BQ8TBF2 198 aa9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 MBD3L1Q8WWY6 194 aa9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 GFRA4Q9GZZ7 299 aa9.74□□□□□ -0.85
SUPT16H-205ENST00000556217 A0A1B0GV50 99 aa9.73□□□□□ -0.85
SUPT16H-205ENST00000556217 UMAD1C9J7I0 102 aa9.73□□□□□ -0.85
SUPT16H-205ENST00000556217 NDUFS6O75380 124 aaKnown RBP9.73□□□□□ -0.85
SUPT16H-205ENST00000556217 COX6A2Q02221 97 aa9.73□□□□□ -0.85
SUPT16H-205ENST00000556217 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
SUPT16H-205ENST00000556217 GAGE12HA6NDE8 117 aa9.72□□□□□ -0.85
SUPT16H-205ENST00000556217 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
SUPT16H-205ENST00000556217 RPL35P42766 123 aaKnown RBP9.72□□□□□ -0.85
SUPT16H-205ENST00000556217 AMTP48728 403 aa9.72□□□□□ -0.85
SUPT16H-205ENST00000556217 PRR3P79522 188 aaKnown RBP9.72□□□□□ -0.85
SUPT16H-205ENST00000556217 KCNRGQ8N5I3 272 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms