RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 DNAJC30Q96LL9 226 aa9.13□□□□□ -0.95
PCNX4-209ENST00000555569 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
PCNX4-209ENST00000555569 RAB19A4D1S5 217 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 RBFOX3A6NFN3 312 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 TMEM262E9PQX1 116 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 PDE6DO43924 150 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 GZMBP10144 247 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 GNG4P50150 75 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 RPS20P60866 119 aaKnown RBP9.12□□□□□ -0.95
PCNX4-209ENST00000555569 OR2D3Q8NGH3 330 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 BAALCQ8WXS3 180 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 SMIM12Q96EX1 92 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 KIF25-AS1Q9Y6Z4 181 aa9.12□□□□□ -0.95
PCNX4-209ENST00000555569 FAT1Q14517 4588 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
PCNX4-209ENST00000555569 C19orf71A6NCJ1 209 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 C1QBP02746 253 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 IGLC6P0CF74 106 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 INAFM2P0DMQ5 153 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 FER1L6-AS1Q8NA97 138 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 TPPP3Q9BW30 176 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 MED9Q9NWA0 146 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 FAM30AQ9NZY2 134 aa9.11□□□□□ -0.95
PCNX4-209ENST00000555569 BCL2P10415 239 aa9.1□□□□□ -0.95
PCNX4-209ENST00000555569 Q0VG73 95 aa9.1□□□□□ -0.95
PCNX4-209ENST00000555569 TMEM97Q5BJF2 176 aa9.1□□□□□ -0.95
PCNX4-209ENST00000555569 ATRAIDQ6UW56 229 aa9.1□□□□□ -0.95
PCNX4-209ENST00000555569 Q8N976 141 aa9.1□□□□□ -0.95
PCNX4-209ENST00000555569 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
PCNX4-209ENST00000555569 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
PCNX4-209ENST00000555569 XKRY2A2RUG3 117 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 P01737 135 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 MGPP08493 103 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 PKIAP61925 76 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 CACNG7P62955 275 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 MPV17L2Q567V2 206 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 CHCHD5Q9BSY4 110 aa9.09□□□□□ -0.95
PCNX4-209ENST00000555569 TRBV20OR9-2A0A075B6H5 130 aa9.08□□□□□ -0.96
PCNX4-209ENST00000555569 CRPP02741 224 aa9.08□□□□□ -0.96
PCNX4-209ENST00000555569 TAGLN2P37802 199 aaKnown RBP9.08□□□□□ -0.96
PCNX4-209ENST00000555569 Q6ZNX1 250 aa9.08□□□□□ -0.96
PCNX4-209ENST00000555569 C15orf54Q8N8G6 183 aa9.08□□□□□ -0.96
PCNX4-209ENST00000555569 C1orf43Q9BWL3 253 aa9.08□□□□□ -0.96
PCNX4-209ENST00000555569 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
PCNX4-209ENST00000555569 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
PCNX4-209ENST00000555569 F2Z2F3 143 aa9.07□□□□□ -0.96
PCNX4-209ENST00000555569 H7C1H1 209 aa9.07□□□□□ -0.96
PCNX4-209ENST00000555569 ANGP03950 147 aaKnown RBP9.07□□□□□ -0.96
PCNX4-209ENST00000555569 ENHOQ6UWT2 76 aa9.07□□□□□ -0.96
PCNX4-209ENST00000555569 Q6ZSA8 131 aa9.07□□□□□ -0.96
PCNX4-209ENST00000555569 NTM-AS1Q6ZSK4 140 aa9.07□□□□□ -0.96
PCNX4-209ENST00000555569 DNAH8Q96JB1 4490 aa9.07□□□□□ -0.96
PCNX4-209ENST00000555569 TRBV25-1A0A075B6N4 114 aa9.06□□□□□ -0.96
PCNX4-209ENST00000555569 M0QY20 66 aa9.06□□□□□ -0.96
PCNX4-209ENST00000555569 TRGC1P0CF51 173 aa9.06□□□□□ -0.96
PCNX4-209ENST00000555569 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
PCNX4-209ENST00000555569 LYZL1Q6UWQ5 148 aa9.06□□□□□ -0.96
PCNX4-209ENST00000555569 AKAP14Q86UN6 197 aa9.06□□□□□ -0.96
PCNX4-209ENST00000555569 GAGE6Q13070 117 aa9.05□□□□□ -0.96
PCNX4-209ENST00000555569 C9orf62Q8N4C0 152 aa9.05□□□□□ -0.96
PCNX4-209ENST00000555569 NUDT10Q8NFP7 164 aa9.05□□□□□ -0.96
PCNX4-209ENST00000555569 NUDT11Q96G61 164 aa9.05□□□□□ -0.96
PCNX4-209ENST00000555569 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
PCNX4-209ENST00000555569 SRRM2Q9UQ35 2752 aaKnown RBP9.05□□□□□ -0.96
PCNX4-209ENST00000555569 IGHV1-24A0A0C4DH33 117 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 NTF3P20783 257 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 RBX1P62877 108 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 IQCJQ1A5X6 159 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 LINC01620Q4KN68 170 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 C14orf177Q52M58 125 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 WDR73Q6P4I2 378 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 DPH3P1Q9H4G8 78 aa9.04□□□□□ -0.96
PCNX4-209ENST00000555569 hCG_2014768A0A024R1R8 64 aa9.03□□□□□ -0.96
PCNX4-209ENST00000555569 CTRLP40313 264 aa9.03□□□□□ -0.96
PCNX4-209ENST00000555569 NKX2-5P52952 324 aaPredicted RBP9.03□□□□□ -0.96
PCNX4-209ENST00000555569 MIAQ16674 131 aa9.03□□□□□ -0.96
PCNX4-209ENST00000555569 OCC1Q8TAD7 63 aa9.03□□□□□ -0.96
PCNX4-209ENST00000555569 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
PCNX4-209ENST00000555569 K7EN84 100 aa9.02□□□□□ -0.97
PCNX4-209ENST00000555569 HLA-DQA1P01909 254 aa9.02□□□□□ -0.97
PCNX4-209ENST00000555569 BLOC1S1P78537 153 aa9.02□□□□□ -0.97
PCNX4-209ENST00000555569 CLPSL2Q6UWE3 100 aa9.02□□□□□ -0.97
PCNX4-209ENST00000555569 ALKAL2Q6UX46 152 aa9.02□□□□□ -0.97
PCNX4-209ENST00000555569 RNASE7Q9H1E1 156 aaKnown RBP9.02□□□□□ -0.97
PCNX4-209ENST00000555569 PRR34Q9NV39 138 aa9.02□□□□□ -0.97
PCNX4-209ENST00000555569 LINC00269Q8N2A0 174 aa9.01□□□□□ -0.97
PCNX4-209ENST00000555569 TMEM243Q9BU79 118 aa9.01□□□□□ -0.97
PCNX4-209ENST00000555569 CNFNQ9BYD5 112 aa9.01□□□□□ -0.97
PCNX4-209ENST00000555569 NIT2Q9NQR4 276 aa9.01□□□□□ -0.97
PCNX4-209ENST00000555569 USP17L23D6RBM5 183 aa9□□□□□ -0.97
PCNX4-209ENST00000555569 TMEM250H0YL14 139 aa9□□□□□ -0.97
PCNX4-209ENST00000555569 TWIST1Q15672 202 aa9□□□□□ -0.97
PCNX4-209ENST00000555569 LINC00528Q8N1L1 170 aa9□□□□□ -0.97
PCNX4-209ENST00000555569 PGLYRP4Q96LB8 373 aa9□□□□□ -0.97
PCNX4-209ENST00000555569 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
PCNX4-209ENST00000555569 KRTAP26-1Q6PEX3 210 aa8.99□□□□□ -0.97
PCNX4-209ENST00000555569 SCXQ7RTU7 201 aa8.99□□□□□ -0.97
PCNX4-209ENST00000555569 LYPD6BQ8NI32 183 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms