RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 PHLDA3Q9Y5J5 127 aa11.05□□□□□ -0.64
XRCC3-211ENST00000555055 ANK3Q12955 4377 aaKnown RBP11.05□□□□□ -0.64
XRCC3-211ENST00000555055 UBE2D1P51668 147 aa11.05□□□□□ -0.64
XRCC3-211ENST00000555055 SPINK13Q1W4C9 94 aa11.05□□□□□ -0.64
XRCC3-211ENST00000555055 A0A1W2PRX2 142 aa11.04□□□□□ -0.64
XRCC3-211ENST00000555055 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
XRCC3-211ENST00000555055 FAM19A4Q96LR4 140 aa11.04□□□□□ -0.64
XRCC3-211ENST00000555055 CYSLTR1Q9Y271 337 aa11.04□□□□□ -0.64
XRCC3-211ENST00000555055 K7EMT4 169 aa11.04□□□□□ -0.64
XRCC3-211ENST00000555055 HTN1P15515 57 aa11.04□□□□□ -0.64
XRCC3-211ENST00000555055 ASIPP42127 132 aa11.04□□□□□ -0.64
XRCC3-211ENST00000555055 ZNF418Q8TF45 676 aaPredicted RBP11.03□□□□□ -0.64
XRCC3-211ENST00000555055 LENEPQ9Y5L5 61 aa11.03□□□□□ -0.64
XRCC3-211ENST00000555055 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
XRCC3-211ENST00000555055 ZNF580Q9UK33 172 aa11.03□□□□□ -0.64
XRCC3-211ENST00000555055 A0A087WWL8 130 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 CD7P09564 240 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 UBE2D3P61077 147 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 UBE2D2P62837 147 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 CDIP1Q9H305 208 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 LINC01549A6NIU2 74 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 KNCNA6PVL3 124 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 ID1P41134 155 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.65
XRCC3-211ENST00000555055 INSL3P51460 131 aa11.01□□□□□ -0.65
XRCC3-211ENST00000555055 CFAP161Q6P656 301 aa11.01□□□□□ -0.65
XRCC3-211ENST00000555055 UBE2E2Q96LR5 201 aa11.01□□□□□ -0.65
XRCC3-211ENST00000555055 ELANEP08246 267 aa11.01□□□□□ -0.65
XRCC3-211ENST00000555055 SMCPP49901 116 aaPredicted RBP11.01□□□□□ -0.65
XRCC3-211ENST00000555055 ESM1Q9NQ30 184 aa11.01□□□□□ -0.65
XRCC3-211ENST00000555055 MDFICQ9P1T7 246 aa11.01□□□□□ -0.65
XRCC3-211ENST00000555055 SUMO2P61956 95 aaKnown RBP11□□□□□ -0.65
XRCC3-211ENST00000555055 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 SBSPONQ8IVN8 264 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 LRRC75A-AS1Q8N1F1 130 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
XRCC3-211ENST00000555055 OTOGQ6ZRI0 2925 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 KLLNB2CW77 178 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 K7EQG2 157 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 PPP1R17O96001 155 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 MED14OSP0DP75 135 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 PRADC1Q9BSG0 188 aa11□□□□□ -0.65
XRCC3-211ENST00000555055 TRBV20-1A0A075B6N2 111 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 SNRPD3P62318 126 aaKnown RBP10.99□□□□□ -0.65
XRCC3-211ENST00000555055 PAPPA-AS1Q5QFB9 102 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 FAM74A4Q5TZK3 123 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 SYT8Q8NBV8 401 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 KLHL30-AS1Q8NEE0 82 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 PPDPFLQ8WWR9 84 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 A0A0J9YX75 114 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 BAALCQ8WXS3 180 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 RASL10AQ92737 203 aa10.99□□□□□ -0.65
XRCC3-211ENST00000555055 DNAJC9-AS1A6NH13 148 aa10.98□□□□□ -0.65
XRCC3-211ENST00000555055 RPL32P62910 135 aaKnown RBP10.98□□□□□ -0.65
XRCC3-211ENST00000555055 Q6ZSV7 163 aa10.98□□□□□ -0.65
XRCC3-211ENST00000555055 TEN1Q86WV5 123 aa10.98□□□□□ -0.65
XRCC3-211ENST00000555055 M0QXV9 152 aa10.98□□□□□ -0.65
XRCC3-211ENST00000555055 TSPAN13O95857 204 aa10.98□□□□□ -0.65
XRCC3-211ENST00000555055 SMR3AQ99954 134 aa10.98□□□□□ -0.65
XRCC3-211ENST00000555055 ZNF815PA8K554 130 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 PLA2G2AP14555 144 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 DEFB131AP59861 70 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 TMEM61Q8N0U2 210 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 DPH3P1Q9H4G8 78 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 NFE4Q86UQ8 179 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 APRG1Q8IVJ8 170 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 Q8N1Y9 231 aa10.97□□□□□ -0.65
XRCC3-211ENST00000555055 SPINK8P0C7L1 97 aa10.96□□□□□ -0.65
XRCC3-211ENST00000555055 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.65
XRCC3-211ENST00000555055 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.65
XRCC3-211ENST00000555055 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.65
XRCC3-211ENST00000555055 C2orf66Q6UXQ4 117 aa10.96□□□□□ -0.65
XRCC3-211ENST00000555055 Q6ZUT4 128 aa10.96□□□□□ -0.65
XRCC3-211ENST00000555055 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
XRCC3-211ENST00000555055 HIVEP2P31629 2446 aa10.96□□□□□ -0.65
XRCC3-211ENST00000555055 FN1P02751 2386 aaKnown RBP10.96□□□□□ -0.66
XRCC3-211ENST00000555055 TMEM89A2RUT3 159 aa10.95□□□□□ -0.66
XRCC3-211ENST00000555055 PRSS29PA6NIE9 313 aa10.95□□□□□ -0.66
XRCC3-211ENST00000555055 F5H697 171 aa10.95□□□□□ -0.66
XRCC3-211ENST00000555055 HERVK_113P61574 105 aa10.95□□□□□ -0.66
XRCC3-211ENST00000555055 SCGB1D4Q6XE38 83 aa10.95□□□□□ -0.66
XRCC3-211ENST00000555055 YAE1D1Q9NRH1 226 aa10.95□□□□□ -0.66
XRCC3-211ENST00000555055 NACAE9PAV3 2078 aa10.95□□□□□ -0.66
XRCC3-211ENST00000555055 NDUFA11Q86Y39 141 aa10.94□□□□□ -0.66
XRCC3-211ENST00000555055 SRSF9Q13242 221 aaKnown RBP eCLIP10.94□□□□□ -0.66
XRCC3-211ENST00000555055 TMEM262E9PQX1 116 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 LGALS9O00182 355 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 PSMB2P49721 201 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 VWFP04275 2813 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 C2CD3Q4AC94 2353 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 IGHV3-73A0A0B4J1V6 119 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 A0A0J9YY99 117 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 J3QKU1 62 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 KRTAP1-1Q07627 177 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 RNF152Q8N8N0 203 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 PLEKHB2Q96CS7 222 aa10.93□□□□□ -0.66
XRCC3-211ENST00000555055 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
XRCC3-211ENST00000555055 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
XRCC3-211ENST00000555055 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms