RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 IGHG4P01861 327 aa12.61□□□□□ -0.39
PCNX1-209ENST00000554879 SRSF2Q01130 221 aaKnown RBP12.61□□□□□ -0.39
PCNX1-209ENST00000554879 COX6CP09669 75 aa12.61□□□□□ -0.39
PCNX1-209ENST00000554879 IGHV3-64A0A075B6Q5 118 aa12.61□□□□□ -0.39
PCNX1-209ENST00000554879 GAGE2AQ6NT46 116 aa12.61□□□□□ -0.39
PCNX1-209ENST00000554879 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
PCNX1-209ENST00000554879 MBD6Q96DN6 1003 aa12.6□□□□□ -0.39
PCNX1-209ENST00000554879 NACAE9PAV3 2078 aa12.6□□□□□ -0.39
PCNX1-209ENST00000554879 SMAD5-AS1Q9Y6J3 95 aa12.6□□□□□ -0.39
PCNX1-209ENST00000554879 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
PCNX1-209ENST00000554879 TRAV12-2A0A075B6T6 113 aa12.6□□□□□ -0.39
PCNX1-209ENST00000554879 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
PCNX1-209ENST00000554879 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
PCNX1-209ENST00000554879 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
PCNX1-209ENST00000554879 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
PCNX1-209ENST00000554879 TEX15Q9BXT5 2789 aa12.59□□□□□ -0.39
PCNX1-209ENST00000554879 LGALS3P17931 250 aaKnown RBP12.59□□□□□ -0.39
PCNX1-209ENST00000554879 MRPL51Q4U2R6 128 aaKnown RBP12.59□□□□□ -0.39
PCNX1-209ENST00000554879 NXT2Q9NPJ8 142 aaKnown RBP12.59□□□□□ -0.39
PCNX1-209ENST00000554879 FAM236AA0A1B0GUQ0 79 aa12.58□□□□□ -0.4
PCNX1-209ENST00000554879 FAM236BA0A1B0GV22 79 aa12.58□□□□□ -0.4
PCNX1-209ENST00000554879 CDIP1Q9H305 208 aa12.58□□□□□ -0.4
PCNX1-209ENST00000554879 MYCNOSP40205 109 aa12.58□□□□□ -0.4
PCNX1-209ENST00000554879 UBE2E2Q96LR5 201 aa12.58□□□□□ -0.4
PCNX1-209ENST00000554879 TNFRSF18Q9Y5U5 241 aa12.58□□□□□ -0.4
PCNX1-209ENST00000554879 ZANQ9Y493 2812 aa12.58□□□□□ -0.4
PCNX1-209ENST00000554879 UNC79Q9P2D8 2635 aa12.57□□□□□ -0.4
PCNX1-209ENST00000554879 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
PCNX1-209ENST00000554879 NPC2P61916 151 aa12.57□□□□□ -0.4
PCNX1-209ENST00000554879 Q6ZQT7 251 aa12.57□□□□□ -0.4
PCNX1-209ENST00000554879 NFE4Q86UQ8 179 aa12.57□□□□□ -0.4
PCNX1-209ENST00000554879 F8P00451 2351 aa12.56□□□□□ -0.4
PCNX1-209ENST00000554879 KNCNA6PVL3 124 aa12.56□□□□□ -0.4
PCNX1-209ENST00000554879 FAM104BQ5XKR9 115 aa12.56□□□□□ -0.4
PCNX1-209ENST00000554879 C18orf65Q6ZTR6 163 aa12.56□□□□□ -0.4
PCNX1-209ENST00000554879 ZNF702PQ9H963 129 aa12.56□□□□□ -0.4
PCNX1-209ENST00000554879 GATA1P15976 413 aaPredicted RBP12.56□□□□□ -0.4
PCNX1-209ENST00000554879 TMEM101Q96IK0 257 aa12.56□□□□□ -0.4
PCNX1-209ENST00000554879 EDN2P20800 178 aa12.55□□□□□ -0.4
PCNX1-209ENST00000554879 CT83Q5H943 113 aa12.55□□□□□ -0.4
PCNX1-209ENST00000554879 A0A1B0GXF2 115 aa12.55□□□□□ -0.4
PCNX1-209ENST00000554879 LINC01587Q99440 93 aa12.55□□□□□ -0.4
PCNX1-209ENST00000554879 PSMB8P28062 276 aa12.55□□□□□ -0.4
PCNX1-209ENST00000554879 TRPT1Q86TN4 253 aaKnown RBP12.55□□□□□ -0.4
PCNX1-209ENST00000554879 MAPKAPK5-AS1Q8N8E1 139 aa12.55□□□□□ -0.4
PCNX1-209ENST00000554879 CLPSL1A2RUU4 121 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 DUSP14O95147 198 aaKnown RBP12.54□□□□□ -0.4
PCNX1-209ENST00000554879 Q6ZSV7 163 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 GPHB5Q86YW7 130 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 STHQ8IWL8 128 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 TMEM126AQ9H061 195 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 GFRA4Q9GZZ7 299 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 KLK9Q9UKQ9 250 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 H3BMM0 161 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
PCNX1-209ENST00000554879 UBE2WQ96B02 151 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 MLST8Q9BVC4 326 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 CELSR2Q9HCU4 2923 aa12.54□□□□□ -0.4
PCNX1-209ENST00000554879 ITPR2Q14571 2701 aa12.53□□□□□ -0.4
PCNX1-209ENST00000554879 J3KT08 172 aa12.53□□□□□ -0.4
PCNX1-209ENST00000554879 CCL24O00175 119 aa12.53□□□□□ -0.4
PCNX1-209ENST00000554879 CITED2Q99967 270 aaPredicted RBP12.53□□□□□ -0.4
PCNX1-209ENST00000554879 PRADC1Q9BSG0 188 aa12.53□□□□□ -0.4
PCNX1-209ENST00000554879 A4D1N5 150 aa12.53□□□□□ -0.4
PCNX1-209ENST00000554879 TCL1BO95988 128 aa12.53□□□□□ -0.4
PCNX1-209ENST00000554879 IGLV1-40P01703 118 aa12.53□□□□□ -0.4
PCNX1-209ENST00000554879 TRAV8-3A0A0A6YYJ7 113 aa12.52□□□□□ -0.4
PCNX1-209ENST00000554879 C14orf178Q8N769 122 aaPredicted RBP12.52□□□□□ -0.4
PCNX1-209ENST00000554879 MSRB1Q9NZV6 116 aa12.52□□□□□ -0.4
PCNX1-209ENST00000554879 HIGD1BQ9P298 99 aa12.52□□□□□ -0.41
PCNX1-209ENST00000554879 INAFM1C9JVW0 142 aa12.52□□□□□ -0.41
PCNX1-209ENST00000554879 CD28P10747 220 aa12.51□□□□□ -0.41
PCNX1-209ENST00000554879 C19orf71A6NCJ1 209 aa12.51□□□□□ -0.41
PCNX1-209ENST00000554879 IGLV2-11P01706 119 aa12.51□□□□□ -0.41
PCNX1-209ENST00000554879 RHODO00212 210 aa12.51□□□□□ -0.41
PCNX1-209ENST00000554879 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
PCNX1-209ENST00000554879 PKIGQ9Y2B9 76 aa12.51□□□□□ -0.41
PCNX1-209ENST00000554879 TRAV26-2A0A0B4J265 109 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 SPANXA1Q9NS26 97 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 SMIM9A6NGZ8 99 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 GNRH2O43555 120 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 CRLF1O75462 422 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 LAGE3Q14657 143 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 CFAP126Q5VTH2 177 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
PCNX1-209ENST00000554879 RPL35AP18077 110 aaKnown RBP12.5□□□□□ -0.41
PCNX1-209ENST00000554879 PLNP26678 52 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 ATP6V0E2Q8NHE4 81 aa12.5□□□□□ -0.41
PCNX1-209ENST00000554879 CSDC2Q9Y534 153 aaKnown RBP12.5□□□□□ -0.41
PCNX1-209ENST00000554879 H7C1H1 209 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 KLK5Q9Y337 293 aaPredicted RBP12.49□□□□□ -0.41
PCNX1-209ENST00000554879 TEX49A0A1B0GTD5 131 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 CRIP1P50238 77 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 TAL2Q16559 108 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 K7EMT4 169 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 LY6G6DO95868 133 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 ATXN8Q156A1 80 aa12.49□□□□□ -0.41
PCNX1-209ENST00000554879 PRO1854Q9UHT4 67 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms