RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 SIVA1O15304 175 aa11.39□□□□□ -0.59
NEK9-204ENST00000554258 CACNG7P62955 275 aa11.39□□□□□ -0.59
NEK9-204ENST00000554258 CLRN3Q8NCR9 226 aa11.39□□□□□ -0.59
NEK9-204ENST00000554258 TRGV2A0A075B6R0 118 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 A0A0J9YY99 117 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 HIGD1CA8MV81 97 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 A8MWV9 139 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 CIDEAO60543 219 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 CFAP126Q5VTH2 177 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 UFSP1Q6NVU6 142 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 CTDSP1Q9GZU7 261 aa11.38□□□□□ -0.59
NEK9-204ENST00000554258 A0A087WWC5 75 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 C7orf77A4D0Y5 90 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 M0R381 172 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 SPANXN1Q5VSR9 72 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 NUP35Q8NFH5 326 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 ZNF479Q96JC4 524 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 JPT2Q9H910 190 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 TMEM242Q9NWH2 141 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 NAT8BQ9UHF3 227 aa11.37□□□□□ -0.59
NEK9-204ENST00000554258 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 APOC3P02656 99 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 CRYGDP07320 174 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 NTF3P20783 257 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 FHL2Q14192 279 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 RHEBQ15382 184 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 ZFP2Q6ZN57 461 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 SVBPQ8N300 66 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 OR4C5Q8NGB2 326 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 PGLYRP4Q96LB8 373 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 TPPP3Q9BW30 176 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 MSRB1Q9NZV6 116 aa11.36□□□□□ -0.59
NEK9-204ENST00000554258 HOXA5P20719 270 aa11.35□□□□□ -0.59
NEK9-204ENST00000554258 NTN5Q8WTR8 489 aaPredicted RBP11.35□□□□□ -0.59
NEK9-204ENST00000554258 IMMP2LQ96T52 175 aa11.35□□□□□ -0.59
NEK9-204ENST00000554258 SAMD10Q9BYL1 202 aa11.35□□□□□ -0.59
NEK9-204ENST00000554258 KIF25-AS1Q9Y6Z4 181 aa11.35□□□□□ -0.59
NEK9-204ENST00000554258 A0A1B0GUT8 65 aa11.34□□□□□ -0.59
NEK9-204ENST00000554258 SNAPINO95295 136 aa11.34□□□□□ -0.59
NEK9-204ENST00000554258 KRTAP10-4P60372 401 aaPredicted RBP11.34□□□□□ -0.59
NEK9-204ENST00000554258 IGHV3-53P01767 116 aa11.33□□□□□ -0.6
NEK9-204ENST00000554258 SLAQ13239 276 aa11.33□□□□□ -0.6
NEK9-204ENST00000554258 RHODO00212 210 aa11.32□□□□□ -0.6
NEK9-204ENST00000554258 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
NEK9-204ENST00000554258 TWIST1Q15672 202 aa11.32□□□□□ -0.6
NEK9-204ENST00000554258 H3BNG1 76 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 TRGC1P0CF51 173 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 SSTP61278 116 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 RIGQ13278 110 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 VSIG2Q96IQ7 327 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 AP1S3Q96PC3 154 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 RPS10P5Q9NQ39 176 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 PRO0255Q9UI72 69 aa11.31□□□□□ -0.6
NEK9-204ENST00000554258 A0A087WWL8 130 aa11.3□□□□□ -0.6
NEK9-204ENST00000554258 TRGV4A0A0C4DH28 118 aa11.3□□□□□ -0.6
NEK9-204ENST00000554258 A0A1B0GXF2 115 aa11.3□□□□□ -0.6
NEK9-204ENST00000554258 EVI2AP22794 236 aa11.3□□□□□ -0.6
NEK9-204ENST00000554258 CRYBA4P53673 196 aa11.3□□□□□ -0.6
NEK9-204ENST00000554258 C14orf178Q8N769 122 aaPredicted RBP11.3□□□□□ -0.6
NEK9-204ENST00000554258 BORCS7Q96B45 105 aa11.3□□□□□ -0.6
NEK9-204ENST00000554258 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
NEK9-204ENST00000554258 A0A1B0GW15 77 aa11.29□□□□□ -0.6
NEK9-204ENST00000554258 TRBV6-4A0A1B0GX49 114 aa11.29□□□□□ -0.6
NEK9-204ENST00000554258 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
NEK9-204ENST00000554258 ATP5L2Q7Z4Y8 100 aa11.29□□□□□ -0.6
NEK9-204ENST00000554258 GATD1Q8NB37 220 aa11.29□□□□□ -0.6
NEK9-204ENST00000554258 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
NEK9-204ENST00000554258 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
NEK9-204ENST00000554258 TRAV9-1A0A075B6T8 112 aa11.28□□□□□ -0.6
NEK9-204ENST00000554258 IGHV3-73A0A0B4J1V6 119 aa11.28□□□□□ -0.6
NEK9-204ENST00000554258 GAS8-AS1O95177 125 aa11.28□□□□□ -0.6
NEK9-204ENST00000554258 RAB4BP61018 213 aa11.28□□□□□ -0.6
NEK9-204ENST00000554258 Q6ZSA8 131 aa11.28□□□□□ -0.6
NEK9-204ENST00000554258 DPH3P1Q9H4G8 78 aa11.28□□□□□ -0.6
NEK9-204ENST00000554258 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
NEK9-204ENST00000554258 MT1HL1P0DM35 61 aa11.27□□□□□ -0.61
NEK9-204ENST00000554258 FAM74A4Q5TZK3 123 aa11.27□□□□□ -0.61
NEK9-204ENST00000554258 SLC25A29Q8N8R3 303 aa11.27□□□□□ -0.61
NEK9-204ENST00000554258 BTF3L4Q96K17 158 aa11.27□□□□□ -0.61
NEK9-204ENST00000554258 PAX4O43316 350 aa11.26□□□□□ -0.61
NEK9-204ENST00000554258 SMIM17P0DL12 118 aa11.26□□□□□ -0.61
NEK9-204ENST00000554258 KCNIP4Q6PIL6 250 aa11.26□□□□□ -0.61
NEK9-204ENST00000554258 SMIM15Q7Z3B0 74 aa11.26□□□□□ -0.61
NEK9-204ENST00000554258 HBBP68871 147 aa11.25□□□□□ -0.61
NEK9-204ENST00000554258 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
NEK9-204ENST00000554258 A0A096LPF7 62 aa11.24□□□□□ -0.61
NEK9-204ENST00000554258 S100A8P05109 93 aa11.24□□□□□ -0.61
NEK9-204ENST00000554258 S100PP25815 95 aa11.24□□□□□ -0.61
NEK9-204ENST00000554258 RHOHQ15669 191 aa11.24□□□□□ -0.61
NEK9-204ENST00000554258 RASL11AQ6T310 242 aa11.24□□□□□ -0.61
NEK9-204ENST00000554258 Q8N814 137 aa11.24□□□□□ -0.61
NEK9-204ENST00000554258 RNF185Q96GF1 192 aa11.24□□□□□ -0.61
NEK9-204ENST00000554258 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
NEK9-204ENST00000554258 LRCOL1A6NCL2 159 aa11.23□□□□□ -0.61
NEK9-204ENST00000554258 K7EQD1 137 aa11.23□□□□□ -0.61
NEK9-204ENST00000554258 M0QY20 66 aa11.23□□□□□ -0.61
NEK9-204ENST00000554258 PSCAO43653 123 aa11.23□□□□□ -0.61
NEK9-204ENST00000554258 RAB4AP20338 218 aa11.23□□□□□ -0.61
NEK9-204ENST00000554258 CAMPP49913 170 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms