RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 SYT8Q8NBV8 401 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 OR11H4Q8NGC9 324 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 TMEM263Q8WUH6 116 aaKnown RBP1.78□□□□□ -2.12
PRPF39-205ENST00000554081 BTF3L4Q96K17 158 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 DNAJC30Q96LL9 226 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 TXNDC17Q9BRA2 123 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 SNHG12Q9BXW3 62 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 GAGE2DQ9UEU5 116 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 PRO0628Q9UI54 55 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 PRO0255Q9UI72 69 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 ZNF580Q9UK33 172 aa1.78□□□□□ -2.12
PRPF39-205ENST00000554081 TRGV11A0A075B6L2 103 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 TRAV8-2A0A0B4J237 113 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 LOC389332A0A1B0GUA5 103 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 FABP5P3A8MUU1 101 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 TAAR5O14804 337 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 CRXO43186 299 aaPredicted RBP1.78□□□□□ -2.13
PRPF39-205ENST00000554081 CXorf1O96002 111 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 P01737 135 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 FAM162BQ5T6X4 162 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 ZNF493Q6ZR52 646 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 CYB561D1Q8N8Q1 229 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 GATD1Q8NB37 220 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 ZNF114Q8NC26 417 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 OR13C6PQ8NH95 151 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 ATP6V0E2Q8NHE4 81 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 FRZBQ92765 325 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 KCNS1Q96KK3 526 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 SIGMAR1Q99720 223 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 PPDPFQ9H3Y8 114 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 TMEM167BQ9NRX6 74 aa1.78□□□□□ -2.13
PRPF39-205ENST00000554081 PRKDCP78527 4128 aaKnown RBP1.77□□□□□ -2.13
PRPF39-205ENST00000554081 HYDINQ4G0P3 5121 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 LINC00315P59091 139 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 RAB5BP61020 215 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 RPL36AP83881 106 aaKnown RBP1.77□□□□□ -2.13
PRPF39-205ENST00000554081 CD164Q04900 197 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 PRR9Q5T870 116 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 MRPL54Q6P161 138 aaKnown RBP1.77□□□□□ -2.13
PRPF39-205ENST00000554081 TMEM256Q8N2U0 113 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 RPL36ALQ969Q0 106 aaKnown RBP1.77□□□□□ -2.13
PRPF39-205ENST00000554081 DERL1Q9BUN8 251 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 RNF126Q9BV68 326 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 SLC25A2Q9BXI2 301 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 TMEM126AQ9H061 195 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 MAP1LC3AQ9H492 121 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 EPDR1Q9UM22 224 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 ARL2-SNX15V9GYD0 113 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 TRAV13-1A0A0B4J241 112 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 TRAV26-2A0A0B4J265 109 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 CTXND1A0A1B0GTU2 59 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 DIRC3C9JPN6 131 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 PEX7O00628 323 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 AMBPP02760 352 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 TCRAP04437 139 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 GIG44P09565 113 aaPredicted RBP1.77□□□□□ -2.13
PRPF39-205ENST00000554081 FCER1GP30273 86 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 SNRPEP62304 92 aaKnown RBP1.77□□□□□ -2.13
PRPF39-205ENST00000554081 HIGD2BQ4VC39 106 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 FA2HQ7L5A8 372 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 TCTE3Q8IZS6 198 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 C6orf223Q8N319 242 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 MAPKAPK5-AS1Q8N8E1 139 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 HIST1H2BAQ96A08 127 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 SMIM7Q9BQ49 75 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 MARVELD1Q9BSK0 173 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 SAMD10Q9BYL1 202 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 CST9LQ9H4G1 147 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 ERG28Q9UKR5 140 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 LINC00588Q9Y4M8 146 aa1.77□□□□□ -2.13
PRPF39-205ENST00000554081 IGLV5-52A0A0A0MRZ9 124 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 A0A1B0GX51 115 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 A0A1W2PRE2 83 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 hDV102S1A0JD36 115 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 LYRM9A8MSI8 78 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 VCYO14598 125 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 CCL25O15444 150 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 P0C879 139 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 HOXA5P20719 270 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 XCL1P47992 114 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 RPS28P62857 69 aaKnown RBP1.76□□□□□ -2.13
PRPF39-205ENST00000554081 LGALS9CQ6DKI2 356 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 SLC25A29Q8N8R3 303 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 LRTM2Q8N967 370 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 THAP8Q8NA92 274 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 OR10AG1Q8NH19 301 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 RNASE7Q9H1E1 156 aaKnown RBP1.76□□□□□ -2.13
PRPF39-205ENST00000554081 OTORQ9NRC9 128 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 ZNF492Q9P255 531 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 Q9UF83 564 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 ANAPC10Q9UM13 185 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 CARHSP1Q9Y2V2 147 aaKnown RBP1.76□□□□□ -2.13
PRPF39-205ENST00000554081 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 GGTLC3B5MD39 225 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 M0R2P5 195 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 SH2D1AO60880 128 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 NCR2O95944 276 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 ZNF80P51504 273 aaPredicted RBP1.76□□□□□ -2.13
PRPF39-205ENST00000554081 C4orf26Q17RF5 130 aa1.76□□□□□ -2.13
PRPF39-205ENST00000554081 TMEM241Q24JQ0 296 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms