RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 PIP4P1Q86T03 277 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 TRAV7A0A075B6U4 112 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 ZNF503-AS2A6NEH8 195 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 MRPL14Q6P1L8 145 aaKnown RBP6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 IGLV3-19P01714 112 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 SBSPONQ8IVN8 264 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 PIP4P2Q8N4L2 257 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 FGF23Q9GZV9 251 aaPredicted RBP6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 PINLYPA6NC86 204 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 PSMG3-AS1Q96PY0 264 aa6.83□□□□□ -1.32
GTF2A1-203ENST00000553612 C22orf34Q6ZV56 151 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 NRACQ8N912 160 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 ZFAND3Q9H8U3 227 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 MRPL36Q9P0J6 103 aaKnown RBP6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 COL6A6A6NMZ7 2263 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 TRAV13-2A0A0B4J235 113 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 LINC00846Q9NV44 126 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 LYRM9A8MSI8 78 aa6.82□□□□□ -1.32
GTF2A1-203ENST00000553612 C15orf65H3BRN8 121 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 IGHV1-2P23083 117 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 CLPSL2Q6UWE3 100 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 IGKV1D-17A0A075B6S4 117 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 APRG1Q8IVJ8 170 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 ABCA4P78363 2273 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 ADAMTSL4-AS1Q5T5F5 129 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 ITLN2Q8WWU7 325 aaPredicted RBP6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 GNLYP22749 145 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 Q8N6K4 173 aa6.81□□□□□ -1.32
GTF2A1-203ENST00000553612 E7EUB6 86 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 ADORA2A-AS1P86434 159 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 COX7B2Q8TF08 81 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 NUP210LQ5VU65 1888 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 IGHV3-30-3P0DP02 117 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 C15orf32Q32M92 178 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 NKAPP1Q8N9T2 125 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 IGHV1-18A0A0C4DH31 117 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 MIAQ16674 131 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 RITA1Q96K30 269 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 ZNF80P51504 273 aaPredicted RBP6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 TSPEAR-AS2P59090 65 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 CFHR3Q02985 330 aa6.8□□□□□ -1.32
GTF2A1-203ENST00000553612 RNF138Q8WVD3 245 aa6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 PROP1O75360 226 aa6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 COL14A1Q05707 1796 aaKnown RBP6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 KTN1-AS1Q86SY8 53 aa6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 WDR90Q96KV7 1748 aa6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 TRBV6-6A0A0A6YYG2 114 aa6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 NDUFA4L2Q9NRX3 87 aa6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 IGHV1-3A0A0C4DH29 117 aa6.79□□□□□ -1.32
GTF2A1-203ENST00000553612 PLXNA4Q9HCM2 1894 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 PRAC2D3DTV9 90 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 LINC00269Q8N2A0 174 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 NREPQ16612 68 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 NLRC5Q86WI3 1866 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 PLXNA2O75051 1894 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 GP9P14770 177 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 ZNF672Q499Z4 452 aaPredicted RBP6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
GTF2A1-203ENST00000553612 COL5A3P25940 1745 aaPredicted RBP6.77□□□□□ -1.32
GTF2A1-203ENST00000553612 PATE3B3GLJ2 98 aa6.77□□□□□ -1.33
GTF2A1-203ENST00000553612 U3KQK5 164 aa6.77□□□□□ -1.33
GTF2A1-203ENST00000553612 Q6ZSR3 168 aa6.77□□□□□ -1.33
GTF2A1-203ENST00000553612 PRYO14603 147 aa6.77□□□□□ -1.33
GTF2A1-203ENST00000553612 RNF185Q96GF1 192 aa6.77□□□□□ -1.33
GTF2A1-203ENST00000553612 TEX22C9J3V5 150 aa6.77□□□□□ -1.33
GTF2A1-203ENST00000553612 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.77□□□□□ -1.33
GTF2A1-203ENST00000553612 CRIP1P50238 77 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 BEAN1Q3B7T3 259 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 SPRR3Q9UBC9 169 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 CELA1Q9UNI1 258 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 LTBP4Q8N2S1 1624 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 MALRD1Q5VYJ5 2156 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 IGHV4OR15-8A0A075B7B6 117 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 A0A087WW49 117 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 KRTAP27-1Q3LI81 207 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 Q8N7P7 452 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 SND1-IT1Q9HBX3 110 aa6.76□□□□□ -1.33
GTF2A1-203ENST00000553612 SPINK13Q1W4C9 94 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 LYPD2Q6UXB3 125 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 FAM19A3Q7Z5A8 133 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 C17orf82Q86X59 251 aaPredicted RBP6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 PTPRSQ13332 1948 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 TRGV2A0A075B6R0 118 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 A0A0J9YWU9 116 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 ZNF71Q9NQZ8 489 aaPredicted RBP6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 IGHV7-4-1A0A0J9YVY3 117 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 ATP5EP2Q5VTU8 51 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 GGNQ86UU5 652 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 TMEM167AQ8TBQ9 72 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 TNCP24821 2201 aa6.75□□□□□ -1.33
GTF2A1-203ENST00000553612 FOXL2NBQ6ZUU3 175 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 NUP210Q8TEM1 1887 aaPredicted RBP6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 HCG22E2RYF7 251 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 HTN3P15516 51 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 ZNF580Q9UK33 172 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 H3BRN7 92 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms