RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	SAMD10	Q9BYL1	202 aa		4.57	□□□□□ -1.68
CNOT2-238	ENST00000552422	RNASE7	Q9H1E1	156 aa	Known RBP	4.57	□□□□□ -1.68
CNOT2-238	ENST00000552422	SMDT1	Q9H4I9	107 aa		4.57	□□□□□ -1.68
CNOT2-238	ENST00000552422	JPT2	Q9H910	190 aa		4.57	□□□□□ -1.68
CNOT2-238	ENST00000552422	MSRB1	Q9NZV6	116 aa		4.57	□□□□□ -1.68
CNOT2-238	ENST00000552422	IGHV3-73	A0A0B4J1V6	119 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	LOC100131303	A0A0U1RQF7	123 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	ZNF727	A8MUV8	499 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422		C9JQL5	133 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	CRYGD	P07320	174 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	LINC00694	P0DN24	101 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	GZMB	P10144	247 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	CTRL	P40313	264 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	FAM74A3	Q4VXF1	159 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	FAM74A4	Q5TZK3	123 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422		Q6ZR54	194 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	FAM231D	Q6ZW35	169 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	NEGR1	Q7Z3B1	354 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	LINC01551	Q86U37	167 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	CNFN	Q9BYD5	112 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	RPP21	Q9H633	154 aa	Known RBP	4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	MRPS16	Q9Y3D3	137 aa	Known RBP	4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	PKD1	P98161	4303 aa		4.56	□□□□□ -1.68
CNOT2-238	ENST00000552422	MUC21	A0A0G2JKD1	596 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	MUC21	A0A140T8X8	626 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422		A0A1W2PPQ1	181 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422		F2Z2F3	143 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	RAB14	P61106	215 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	IFITM2	Q01629	132 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	PEA15	Q15121	130 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	SPANXN1	Q5VSR9	72 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	SH2D6	Q7Z4S9	175 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	GTSF1	Q8WW33	167 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	AP1S3	Q96PC3	154 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	PRADC1	Q9BSG0	188 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	TPPP3	Q9BW30	176 aa		4.55	□□□□□ -1.68
CNOT2-238	ENST00000552422	IGLV2-18	A0A075B6J9	118 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422		A8MWL6	223 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	ERVFC1-1	P60608	527 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	CACNG7	P62955	275 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	TMEM241	Q24JQ0	296 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	SOHLH1	Q5JUK2	328 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	CLLU1	Q5K131	121 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	LYPD5	Q6UWN5	251 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	LYZL1	Q6UWQ5	148 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	C14orf178	Q8N769	122 aa	Predicted RBP	4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	ISOC2	Q96AB3	205 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422		Q9H8V8	135 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422		Q9UF83	564 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	KIF25-AS1	Q9Y6Z4	181 aa		4.54	□□□□□ -1.68
CNOT2-238	ENST00000552422	TRBV10-1	A0A0K0K1A3	114 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	NBDY	A0A0U1RRE5	68 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422		M0R2N4	97 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	SIVA1	O15304	175 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	GATC	O43716	136 aa	Known RBP	4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	NTF3	P20783	257 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	LINC00315	P59091	139 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	RAB4B	P61018	213 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	RPL23	P62829	140 aa	Known RBP	4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	ZNF56	Q15929	161 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	TTC32	Q5I0X7	151 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	WDR73	Q6P4I2	378 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	GFRA4	Q9GZZ7	299 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	GTSF1L	Q9H1H1	148 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	OSTC	Q9NRP0	149 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	NAT8	Q9UHE5	227 aa		4.53	□□□□□ -1.68
CNOT2-238	ENST00000552422	DNAH11	Q96DT5	4516 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	FAM231B	A6NCW3	169 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	HIGD1C	A8MV81	97 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	TRGC1	P0CF51	173 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	SMIM17	P0DL12	118 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	EVI2A	P22794	236 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	FOXA3	P55318	350 aa	Predicted RBP	4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	SST	P61278	116 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	ADIRF	Q15847	76 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	WFDC10B	Q8IUB3	73 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	C15orf54	Q8N8G6	183 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	OR10G8	Q8NGN5	311 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	ATP6V0E2	Q8NHE4	81 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	TSKU	Q8WUA8	353 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422		V9GYV3	84 aa		4.52	□□□□□ -1.69
CNOT2-238	ENST00000552422	TRBV7-3	A0A075B6L6	115 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	GAGE12J	A6NER3	117 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422		K7EP13	123 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	RTL8C	O15255	209 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	DNAH10OS	P0CZ25	163 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	UBE2D3	P61077	147 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	UBE2D2	P62837	147 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	RPL36A	P83881	106 aa	Known RBP	4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	GAGE1	Q13065	139 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	GAGE4	Q13068	117 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	GAGE5	Q13069	117 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	LELP1	Q5T871	98 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	C1orf134	Q5TEV5	83 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	NEXN-AS1	Q8NBZ9	246 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422	DPH3P1	Q9H4G8	78 aa		4.51	□□□□□ -1.69
CNOT2-238	ENST00000552422		A0A087WWC5	75 aa		4.5	□□□□□ -1.69
CNOT2-238	ENST00000552422		A0A1B0GUT8	65 aa		4.5	□□□□□ -1.69
CNOT2-238	ENST00000552422	SMIM27	A0A1W2PRY6	76 aa		4.5	□□□□□ -1.69
CNOT2-238	ENST00000552422		H7C1H1	209 aa		4.5	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms