RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 IGHV1-58A0A0C4DH39 117 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 A6NED7 52 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 C1orf196B1AJZ1 125 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 LY6LH3BQJ8 138 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 OR2T1O43869 369 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 IGKV1D-33P01593 117 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 IGKV1-33P01594 117 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H2BOP23527 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H2BBP33778 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 RBM11P57052 281 aaKnown RBP3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H2BDP58876 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 LINC00313P59037 77 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H2BCP62807 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST2H2BEQ16778 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.01□□□□□ -1.93
CPSF6-206ENST00000550987 TMEM244Q5VVB8 128 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 IGFL1Q6UW32 110 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 BRD3OSQ6XYD6 125 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 SCXQ7RTU7 201 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 SNX29P2Q8IUI4 249 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 OR4A5Q8NH83 315 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H2BHQ93079 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H2BNQ99877 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HIST1H2BMQ99879 126 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 DUSP21Q9H596 190 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 MARCOQ9UEW3 520 aaPredicted RBP3.01□□□□□ -1.93
CPSF6-206ENST00000550987 SNX12Q9UMY4 172 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 MPC1Q9Y5U8 109 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 HSPE1-MOB4S4R3N1 261 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 LPAP08519 4548 aa3.01□□□□□ -1.93
CPSF6-206ENST00000550987 A0A0B4J2C4 111 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 OR2T8A6NH00 312 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 I3L521 148 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 TAX1BP3O14907 124 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 RTL8CO15255 209 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 NDUFB3O43676 98 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 IFI6P09912 130 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 S100A4P26447 101 aaKnown RBP3□□□□□ -1.93
CPSF6-206ENST00000550987 BRS3P32247 399 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF93P35789 620 aaPredicted RBP3□□□□□ -1.93
CPSF6-206ENST00000550987 TAS2R45P59539 299 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 YPEL3P61236 119 aaPredicted RBP3□□□□□ -1.93
CPSF6-206ENST00000550987 LGALSLQ3ZCW2 172 aaPredicted RBP3□□□□□ -1.93
CPSF6-206ENST00000550987 LCN15Q6UWW0 184 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 LINC00305Q7Z4B0 112 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 WFDC9Q8NEX5 89 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 OR5D14Q8NGL3 314 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 RAB2BQ8WUD1 216 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 YPEL2Q96QA6 119 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 MIEN1Q9BRT3 115 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 TSSK6Q9BXA6 273 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 MRPL32Q9BYC8 188 aaKnown RBP3□□□□□ -1.93
CPSF6-206ENST00000550987 C16orf95Q9H693 158 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 OTORQ9NRC9 128 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 MED9Q9NWA0 146 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF586Q9NXT0 402 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 FUT9Q9Y231 359 aa3□□□□□ -1.93
CPSF6-206ENST00000550987 IGLV3-9A0A075B6K5 115 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 A8MWP4 228 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 FNDC10F2Z333 226 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 H3BQ85 93 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 H3BQF6 201 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF73O43830 326 aaPredicted RBP2.99□□□□□ -1.93
CPSF6-206ENST00000550987 NDUFB2O95178 105 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 MT-ND4LP03901 98 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 HMGN2P05204 90 aaKnown RBP2.99□□□□□ -1.93
CPSF6-206ENST00000550987 TMEM258P61165 79 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 CCL20P78556 96 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 QRFPP83859 136 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 HES1Q14469 280 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF141Q15928 474 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 SPRNQ5BIV9 151 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 MEIG1Q5JSS6 88 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 LGALS9CQ6DKI2 356 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 NOXRED1Q6NXP6 359 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 AMTNQ6UX39 209 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 TMEM136Q6ZRR5 245 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 ATOH7Q8N100 152 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 ZNF563Q8TA94 476 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 H1FXQ92522 213 aaKnown RBP2.99□□□□□ -1.93
CPSF6-206ENST00000550987 CARD19Q96LW7 228 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 SDF2Q99470 211 aa2.99□□□□□ -1.93
CPSF6-206ENST00000550987 ADAT1Q9BUB4 502 aaKnown RBP2.99□□□□□ -1.93
CPSF6-206ENST00000550987 NOP16Q9Y3C1 178 aaKnown RBP2.99□□□□□ -1.93
CPSF6-206ENST00000550987 MRPS16Q9Y3D3 137 aaKnown RBP2.99□□□□□ -1.93
CPSF6-206ENST00000550987 DSPPQ9NZW4 1301 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 IGKV1OR2-108A0A075B7D4 117 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 IGHV3OR15-7A0A075B7D8 119 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 TRAV13-1A0A0B4J241 112 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 TRAV41A0A0B4J266 112 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 C7orf71A4D174 169 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 A8MWV9 139 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 FABP2P12104 132 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 DAPP51397 102 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 AKR1C2P52895 323 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 S100A10P60903 97 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 FGF12P61328 243 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 LSM3P62310 102 aaKnown RBP2.98□□□□□ -1.93
CPSF6-206ENST00000550987 UBE2BP63146 152 aa2.98□□□□□ -1.93
CPSF6-206ENST00000550987 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms