RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 IGLV2-18A0A075B6J9 118 aa14.24□□□□□ -0.13
SCARB1-211ENST00000546215 MRPL54Q6P161 138 aaKnown RBP14.24□□□□□ -0.13
SCARB1-211ENST00000546215 RASL11AQ6T310 242 aa14.24□□□□□ -0.13
SCARB1-211ENST00000546215 TRAV26-2A0A0B4J265 109 aa14.23□□□□□ -0.13
SCARB1-211ENST00000546215 A0A1B0GW15 77 aa14.23□□□□□ -0.13
SCARB1-211ENST00000546215 A0A1B0GXF2 115 aa14.23□□□□□ -0.13
SCARB1-211ENST00000546215 SLC7A5P1Q8MH63 180 aa14.23□□□□□ -0.13
SCARB1-211ENST00000546215 CLRN3Q8NCR9 226 aa14.23□□□□□ -0.13
SCARB1-211ENST00000546215 RNF185Q96GF1 192 aa14.23□□□□□ -0.13
SCARB1-211ENST00000546215 CAMPP49913 170 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 AMN1Q8IY45 258 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 DNAJC30Q96LL9 226 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 IMMP2LQ96T52 175 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 DNAH2Q9P225 4427 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 C7orf77A4D0Y5 90 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 RAB4AP20338 218 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 HBBP68871 147 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 LELP1Q5T871 98 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 NIT2Q9NQR4 276 aa14.22□□□□□ -0.13
SCARB1-211ENST00000546215 APOC3P02656 99 aa14.21□□□□□ -0.14
SCARB1-211ENST00000546215 ATP5L2Q7Z4Y8 100 aa14.21□□□□□ -0.14
SCARB1-211ENST00000546215 TMEM242Q9NWH2 141 aa14.21□□□□□ -0.14
SCARB1-211ENST00000546215 TNFRSF18Q9Y5U5 241 aa14.21□□□□□ -0.14
SCARB1-211ENST00000546215 M0R2N4 97 aa14.2□□□□□ -0.14
SCARB1-211ENST00000546215 SIVA1O15304 175 aa14.2□□□□□ -0.14
SCARB1-211ENST00000546215 RHEBQ15382 184 aa14.2□□□□□ -0.14
SCARB1-211ENST00000546215 WFDC10BQ8IUB3 73 aa14.2□□□□□ -0.14
SCARB1-211ENST00000546215 FRZBQ92765 325 aa14.2□□□□□ -0.14
SCARB1-211ENST00000546215 A0A087WWC5 75 aa14.19□□□□□ -0.14
SCARB1-211ENST00000546215 FAM104BQ5XKR9 115 aa14.19□□□□□ -0.14
SCARB1-211ENST00000546215 Q6ZR54 194 aa14.19□□□□□ -0.14
SCARB1-211ENST00000546215 IGHV3-38A0A0C4DH36 116 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 NBDYA0A0U1RRE5 68 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 GAS8-AS1O95177 125 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 S100A8P05109 93 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 NDUFA5Q16718 116 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 DAZ4Q86SG3 579 aaKnown RBP14.18□□□□□ -0.14
SCARB1-211ENST00000546215 BTF3L4Q96K17 158 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 DAZ3Q9NR90 486 aaKnown RBP14.18□□□□□ -0.14
SCARB1-211ENST00000546215 FRAS1Q86XX4 4008 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 DNAH10Q8IVF4 4471 aa14.18□□□□□ -0.14
SCARB1-211ENST00000546215 OR10J3Q5JRS4 329 aa14.17□□□□□ -0.14
SCARB1-211ENST00000546215 SVBPQ8N300 66 aa14.17□□□□□ -0.14
SCARB1-211ENST00000546215 RPL39LQ96EH5 51 aaKnown RBP14.17□□□□□ -0.14
SCARB1-211ENST00000546215 RPS10P5Q9NQ39 176 aa14.17□□□□□ -0.14
SCARB1-211ENST00000546215 TRAV8-6A0A0B4J262 113 aa14.17□□□□□ -0.14
SCARB1-211ENST00000546215 MRAP2Q96G30 205 aa14.17□□□□□ -0.14
SCARB1-211ENST00000546215 MRPL51Q4U2R6 128 aaKnown RBP14.16□□□□□ -0.14
SCARB1-211ENST00000546215 KCNIP4Q6PIL6 250 aa14.16□□□□□ -0.14
SCARB1-211ENST00000546215 DNAH10OSP0CZ25 163 aa14.15□□□□□ -0.14
SCARB1-211ENST00000546215 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.15□□□□□ -0.14
SCARB1-211ENST00000546215 KRTAP1-5Q9BYS1 174 aa14.15□□□□□ -0.14
SCARB1-211ENST00000546215 SNAPINO95295 136 aa14.14□□□□□ -0.15
SCARB1-211ENST00000546215 NTM-AS1Q6ZSK4 140 aa14.14□□□□□ -0.15
SCARB1-211ENST00000546215 TRBV6-8A0A0A6YYG3 113 aa14.13□□□□□ -0.15
SCARB1-211ENST00000546215 TRBV6-5A0A0K0K1A5 114 aa14.13□□□□□ -0.15
SCARB1-211ENST00000546215 SMKR1H3BMG3 65 aa14.13□□□□□ -0.15
SCARB1-211ENST00000546215 RPS10P46783 165 aaKnown RBP14.13□□□□□ -0.15
SCARB1-211ENST00000546215 URGCP-MRPS24S4R325 110 aa14.13□□□□□ -0.15
SCARB1-211ENST00000546215 TRAV9-1A0A075B6T8 112 aa14.13□□□□□ -0.15
SCARB1-211ENST00000546215 NCR2O95944 276 aa14.12□□□□□ -0.15
SCARB1-211ENST00000546215 S100PP25815 95 aa14.12□□□□□ -0.15
SCARB1-211ENST00000546215 TMEM97Q5BJF2 176 aa14.12□□□□□ -0.15
SCARB1-211ENST00000546215 TTC32Q5I0X7 151 aa14.12□□□□□ -0.15
SCARB1-211ENST00000546215 LINC01556Q5JQF7 62 aa14.12□□□□□ -0.15
SCARB1-211ENST00000546215 SDHAF1A6NFY7 115 aa14.11□□□□□ -0.15
SCARB1-211ENST00000546215 NRACQ8N912 160 aa14.11□□□□□ -0.15
SCARB1-211ENST00000546215 CKS2P33552 79 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 ST20Q9HBF5 79 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 DNAH17Q9UFH2 4485 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 K7EP13 123 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 PPP1R17O96001 155 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 NIT1Q86X76 327 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 Q8N3U1 123 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 DEFB104AQ8WTQ1 72 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 TMEM70Q9BUB7 260 aa14.09□□□□□ -0.15
SCARB1-211ENST00000546215 TRAV9-2A0A087WT02 112 aa14.08□□□□□ -0.16
SCARB1-211ENST00000546215 POLR2KP53803 58 aaKnown RBP14.08□□□□□ -0.16
SCARB1-211ENST00000546215 IQCJQ1A5X6 159 aa14.08□□□□□ -0.16
SCARB1-211ENST00000546215 ATRAIDQ6UW56 229 aa14.08□□□□□ -0.16
SCARB1-211ENST00000546215 TRBV25-1A0A075B6N4 114 aa14.07□□□□□ -0.16
SCARB1-211ENST00000546215 D6R8Y8 96 aa14.07□□□□□ -0.16
SCARB1-211ENST00000546215 COTL1Q14019 142 aa14.07□□□□□ -0.16
SCARB1-211ENST00000546215 TRBV24-1A0A075B6N3 115 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 IGHV1-24A0A0C4DH33 117 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 IGHV3-30P01768 117 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 PPBPP02775 128 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 IGHV3-30-3P0DP02 117 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 IGHV3-30-5P0DP03 117 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 C1orf134Q5TEV5 83 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 TMEM136Q6ZRR5 245 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 FAT2Q9NYQ8 4349 aa14.06□□□□□ -0.16
SCARB1-211ENST00000546215 I3L3M4 83 aa14.05□□□□□ -0.16
SCARB1-211ENST00000546215 SUMO2P61956 95 aaKnown RBP14.05□□□□□ -0.16
SCARB1-211ENST00000546215 TRBV27A0A0K0K1C4 114 aa14.05□□□□□ -0.16
SCARB1-211ENST00000546215 TNFRSF6BO95407 300 aa14.05□□□□□ -0.16
SCARB1-211ENST00000546215 PMCHP20382 165 aa14.05□□□□□ -0.16
SCARB1-211ENST00000546215 ORMDL3Q8N138 153 aa14.05□□□□□ -0.16
SCARB1-211ENST00000546215 C6orf223Q8N319 242 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms