RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ID1P41134 155 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 ADORA2A-AS1P86434 159 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 UBE2WQ96B02 151 aa10.56□□□□□ -0.72
SRP54-202ENST00000546080 IGHV3OR16-10A0A075B7F0 116 aa10.55□□□□□ -0.72
SRP54-202ENST00000546080 IFITM1P13164 125 aa10.55□□□□□ -0.72
SRP54-202ENST00000546080 Q6Q795 121 aa10.55□□□□□ -0.72
SRP54-202ENST00000546080 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
SRP54-202ENST00000546080 C9orf85Q96MD7 179 aa10.55□□□□□ -0.72
SRP54-202ENST00000546080 LINC01600Q96MT4 127 aa10.55□□□□□ -0.72
SRP54-202ENST00000546080 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
SRP54-202ENST00000546080 ZNF580Q9UK33 172 aa10.55□□□□□ -0.72
SRP54-202ENST00000546080 SVEP1Q4LDE5 3571 aa10.54□□□□□ -0.72
SRP54-202ENST00000546080 IGLV4-3A0A075B6K6 122 aa10.54□□□□□ -0.72
SRP54-202ENST00000546080 IGHV3-16A0A0C4DH30 117 aa10.54□□□□□ -0.72
SRP54-202ENST00000546080 PF4V1P10720 104 aa10.54□□□□□ -0.72
SRP54-202ENST00000546080 CACNA1AO00555 2505 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 H3BUA1 57 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 I3L3M4 83 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 LMO4P61968 165 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 ODF3Q96PU9 254 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 TIMM21Q9BVV7 248 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 BPESC1Q9GZL8 116 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 NCOR2Q9Y618 2525 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 GAGE12JA6NER3 117 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 K7ENP7 123 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 GAGE7O76087 117 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 GAGE4Q13068 117 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
SRP54-202ENST00000546080 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.72
SRP54-202ENST00000546080 C2orf82Q6UX34 121 aa10.52□□□□□ -0.72
SRP54-202ENST00000546080 SPXQ9BT56 116 aa10.52□□□□□ -0.72
SRP54-202ENST00000546080 CHD8Q9HCK8 2581 aa10.52□□□□□ -0.73
SRP54-202ENST00000546080 A0A1W2PPR1 153 aa10.52□□□□□ -0.73
SRP54-202ENST00000546080 PRSS2P07478 247 aa10.52□□□□□ -0.73
SRP54-202ENST00000546080 UBTD1Q9HAC8 227 aa10.52□□□□□ -0.73
SRP54-202ENST00000546080 ICOSQ9Y6W8 199 aa10.52□□□□□ -0.73
SRP54-202ENST00000546080 CCDC179H3BU77 68 aa10.51□□□□□ -0.73
SRP54-202ENST00000546080 EDN2P20800 178 aa10.51□□□□□ -0.73
SRP54-202ENST00000546080 HRNRQ86YZ3 2850 aaPredicted RBP10.51□□□□□ -0.73
SRP54-202ENST00000546080 TRAV12-2A0A075B6T6 113 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 BRI3O95415 125 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 CD28P10747 220 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 LY6EQ16553 131 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 BRD3OSQ6XYD6 125 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 LITAFQ99732 161 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 CACNA1BQ00975 2339 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 IGKV3-20P01619 116 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 COX6CP09669 75 aa10.5□□□□□ -0.73
SRP54-202ENST00000546080 H3BT86 120 aa10.49□□□□□ -0.73
SRP54-202ENST00000546080 H7C423 109 aa10.49□□□□□ -0.73
SRP54-202ENST00000546080 IGHG2P01859 326 aa10.49□□□□□ -0.73
SRP54-202ENST00000546080 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
SRP54-202ENST00000546080 SPANXCQ9NY87 97 aa10.49□□□□□ -0.73
SRP54-202ENST00000546080 IGHV1OR15-1A0A075B7D0 117 aa10.49□□□□□ -0.73
SRP54-202ENST00000546080 TRAV8-3A0A0A6YYJ7 113 aa10.48□□□□□ -0.73
SRP54-202ENST00000546080 NDUFA12Q9UI09 145 aa10.48□□□□□ -0.73
SRP54-202ENST00000546080 IGF2RP11717 2491 aa10.48□□□□□ -0.73
SRP54-202ENST00000546080 IGHV1-58A0A0C4DH39 117 aa10.48□□□□□ -0.73
SRP54-202ENST00000546080 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
SRP54-202ENST00000546080 MRPL23Q16540 153 aaKnown RBP10.48□□□□□ -0.73
SRP54-202ENST00000546080 K7EMT4 169 aa10.47□□□□□ -0.73
SRP54-202ENST00000546080 NPC2P61916 151 aa10.47□□□□□ -0.73
SRP54-202ENST00000546080 FOXC1Q12948 553 aa10.47□□□□□ -0.73
SRP54-202ENST00000546080 MIAQ16674 131 aa10.47□□□□□ -0.73
SRP54-202ENST00000546080 ADAMTSL4-AS1Q5T5F5 129 aa10.47□□□□□ -0.73
SRP54-202ENST00000546080 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
SRP54-202ENST00000546080 CLEC2BQ92478 149 aa10.46□□□□□ -0.73
SRP54-202ENST00000546080 ZFHX3Q15911 3703 aa10.46□□□□□ -0.73
SRP54-202ENST00000546080 SPINK13Q1W4C9 94 aa10.46□□□□□ -0.74
SRP54-202ENST00000546080 RELNP78509 3460 aa10.46□□□□□ -0.74
SRP54-202ENST00000546080 H3BUX3 64 aa10.45□□□□□ -0.74
SRP54-202ENST00000546080 SNRPD3P62318 126 aaKnown RBP10.45□□□□□ -0.74
SRP54-202ENST00000546080 BLCAPP62952 87 aa10.45□□□□□ -0.74
SRP54-202ENST00000546080 RNASE13Q5GAN3 156 aaKnown RBP10.45□□□□□ -0.74
SRP54-202ENST00000546080 Q6ZSV7 163 aa10.45□□□□□ -0.74
SRP54-202ENST00000546080 MED13LQ71F56 2210 aa10.44□□□□□ -0.74
SRP54-202ENST00000546080 LST1O00453 97 aa10.44□□□□□ -0.74
SRP54-202ENST00000546080 IGLV1-40P01703 118 aa10.44□□□□□ -0.74
SRP54-202ENST00000546080 CEMP1Q6PRD7 247 aaPredicted RBP10.44□□□□□ -0.74
SRP54-202ENST00000546080 YAE1D1Q9NRH1 226 aa10.44□□□□□ -0.74
SRP54-202ENST00000546080 SPANXA1Q9NS26 97 aa10.44□□□□□ -0.74
SRP54-202ENST00000546080 TRGV11A0A075B6L2 103 aa10.43□□□□□ -0.74
SRP54-202ENST00000546080 FAM240AA0A1B0GVK7 77 aa10.43□□□□□ -0.74
SRP54-202ENST00000546080 TMEM61Q8N0U2 210 aa10.43□□□□□ -0.74
SRP54-202ENST00000546080 VSIG2Q96IQ7 327 aa10.43□□□□□ -0.74
SRP54-202ENST00000546080 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
SRP54-202ENST00000546080 A6NDX4 124 aa10.43□□□□□ -0.74
SRP54-202ENST00000546080 FAM104AQ969W3 186 aa10.43□□□□□ -0.74
SRP54-202ENST00000546080 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
SRP54-202ENST00000546080 TINCRA0A1B0GVN0 87 aa10.42□□□□□ -0.74
SRP54-202ENST00000546080 ASH1LQ9NR48 2969 aaKnown RBP10.42□□□□□ -0.74
SRP54-202ENST00000546080 A8MZ25 164 aa10.42□□□□□ -0.74
SRP54-202ENST00000546080 IGHV4-38-2P0DP08 117 aa10.42□□□□□ -0.74
SRP54-202ENST00000546080 DEFB121Q5J5C9 76 aa10.42□□□□□ -0.74
SRP54-202ENST00000546080 KLRB1Q12918 225 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms