RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PHLDA3Q9Y5J5 127 aa5.18□□□□□ -1.58
SNHG1-223ENST00000545440 hDV102S1A0JD36 115 aa5.17□□□□□ -1.58
SNHG1-223ENST00000545440 TEX46H3BTG2 121 aa5.17□□□□□ -1.58
SNHG1-223ENST00000545440 VCYO14598 125 aa5.17□□□□□ -1.58
SNHG1-223ENST00000545440 LAGE3Q14657 143 aa5.17□□□□□ -1.58
SNHG1-223ENST00000545440 OR10J3Q5JRS4 329 aa5.17□□□□□ -1.58
SNHG1-223ENST00000545440 ATP6V0E2Q8NHE4 81 aa5.17□□□□□ -1.58
SNHG1-223ENST00000545440 SFRP2Q96HF1 295 aa5.17□□□□□ -1.58
SNHG1-223ENST00000545440 A0A087WWC5 75 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 TMSB15BA0A087X1C1 80 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 GRIFINA4D1Z8 144 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 M0R381 172 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 C1QBP02746 253 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 RPL35P42766 123 aaKnown RBP5.16□□□□□ -1.58
SNHG1-223ENST00000545440 SULT1A2P50226 295 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 FAM74A4Q5TZK3 123 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 BAGE2Q86Y30 109 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 SMIM12Q96EX1 92 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 SAMD10Q9BYL1 202 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 JPT2Q9H910 190 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 GNG13Q9P2W3 67 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 TNFRSF18Q9Y5U5 241 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 LRP1BQ9NZR2 4599 aa5.16□□□□□ -1.58
SNHG1-223ENST00000545440 A0A087WTM6 91 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 TRBV10-1A0A0K0K1A3 114 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 IBA57-AS1B1ANH7 110 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 SNAI2O43623 268 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 OR5AL1P0C617 328 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 RPL19P84098 196 aaKnown RBP5.15□□□□□ -1.59
SNHG1-223ENST00000545440 MEF2BQ02080 365 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-223ENST00000545440 GAGE5Q13069 117 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 SLC51BQ86UW2 128 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 C14orf178Q8N769 122 aaPredicted RBP5.15□□□□□ -1.59
SNHG1-223ENST00000545440 PRR26Q8N8Z3 221 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 DERL1Q9BUN8 251 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
SNHG1-223ENST00000545440 RYR1P21817 5038 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 DNAH5Q8TE73 4624 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 HSPG2P98160 4391 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 PDE6DO43924 150 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 IFNA1P01562 189 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 BCL2P10415 239 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
SNHG1-223ENST00000545440 CCL20P78556 96 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 CENPWQ5EE01 88 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 PRR27Q6MZM9 219 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 AKAP14Q86UN6 197 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 OR10AG1Q8NH19 301 aa5.14□□□□□ -1.59
SNHG1-223ENST00000545440 TRBV7-3A0A075B6L6 115 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 PSCAO43653 123 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 IGHV3-30P01768 117 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 IGHV3-33P01772 117 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 IGHV3-30-3P0DP02 117 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 IGHV3-30-5P0DP03 117 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 TAGLN2P37802 199 aaKnown RBP5.13□□□□□ -1.59
SNHG1-223ENST00000545440 GNG4P50150 75 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 RAB4BP61018 213 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 RPL36AP83881 106 aaKnown RBP5.13□□□□□ -1.59
SNHG1-223ENST00000545440 C9orf62Q8N4C0 152 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 MAPKAPK5-AS1Q8N8E1 139 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 OR10G8Q8NGN5 311 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 AP1S3Q96PC3 154 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 Q9UF83 564 aa5.13□□□□□ -1.59
SNHG1-223ENST00000545440 PCLOQ9Y6V0 5065 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 TRAV8-3A0A0A6YYJ7 113 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 LRCOL1A6NCL2 159 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 IGLV2-8P01709 118 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 VPREB1P12018 145 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 RPS20P60866 119 aaKnown RBP5.12□□□□□ -1.59
SNHG1-223ENST00000545440 UBE2D3P61077 147 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 UBE2D2P62837 147 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 ZNF56Q15929 161 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 SPANXN1Q5VSR9 72 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 WDR73Q6P4I2 378 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 CHCHD7Q9BUK0 85 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 Q9HAA7 133 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 BIN3Q9NQY0 253 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 VAX2Q9UIW0 290 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 URGCP-MRPS24S4R325 110 aa5.12□□□□□ -1.59
SNHG1-223ENST00000545440 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
SNHG1-223ENST00000545440 TRBV20OR9-2A0A075B6H5 130 aa5.11□□□□□ -1.59
SNHG1-223ENST00000545440 C19orf71A6NCJ1 209 aa5.11□□□□□ -1.59
SNHG1-223ENST00000545440 IGLC6P0CF74 106 aa5.11□□□□□ -1.59
SNHG1-223ENST00000545440 NIT1Q86X76 327 aa5.11□□□□□ -1.59
SNHG1-223ENST00000545440 NEXN-AS1Q8NBZ9 246 aa5.11□□□□□ -1.59
SNHG1-223ENST00000545440 XKRY2A2RUG3 117 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 RAB19A4D1S5 217 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 P01737 135 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 SMIM17P0DL12 118 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 FUSP35637 526 aaKnown RBP eCLIP5.1□□□□□ -1.59
SNHG1-223ENST00000545440 CACNG7P62955 275 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 DAZ4Q86SG3 579 aaKnown RBP5.1□□□□□ -1.59
SNHG1-223ENST00000545440 Q8N814 137 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.1□□□□□ -1.59
SNHG1-223ENST00000545440 FER1L6-AS1Q8NA97 138 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 OR2D3Q8NGH3 330 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 RMI2Q96E14 147 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
SNHG1-223ENST00000545440 DAZ3Q9NR90 486 aaKnown RBP5.1□□□□□ -1.59
SNHG1-223ENST00000545440 MED9Q9NWA0 146 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms