RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 GNG8Q9UK08 70 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 PRELID3BQ9Y3B1 194 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 VPS13BQ7Z7G8 4022 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 FAT2Q9NYQ8 4349 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 TRAV14DV4A0A0A6YYC5 116 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 A0A0J9YX75 114 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 TMEM235A6NFC5 223 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 SDHAF1A6NFY7 115 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 TMEM212A6NML5 194 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 PPP5D1E7EU14 171 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 K7EP13 123 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 GEMIN2O14893 280 aaKnown RBP1.98□□□□□ -2.09
SNHG1-222ENST00000545308 DEFB4AO15263 64 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 CTSDP07339 412 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-222ENST00000545308 UCHL1P09936 223 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 GZMBP10144 247 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 COX4I1P13073 169 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 ZNF93P35789 620 aaPredicted RBP1.98□□□□□ -2.09
SNHG1-222ENST00000545308 DEFA1P59665 94 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 B2MP61769 119 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 GUK1Q16774 197 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 KLK9Q2XQG4 91 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 C12orf74Q32Q52 190 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 TMEM97Q5BJF2 176 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 STX12Q86Y82 276 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 OR5AK2Q8NH90 309 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 GINS3Q9BRX5 216 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 TMEM138Q9NPI0 162 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 SAR1AQ9NR31 198 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 CKLFQ9UBR5 152 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 KLK9Q9UKQ9 250 aa1.98□□□□□ -2.09
SNHG1-222ENST00000545308 RBM7Q9Y580 266 aaKnown RBP1.98□□□□□ -2.09
SNHG1-222ENST00000545308 TRBV20OR9-2A0A075B6H5 130 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 TRAV3A0A0B4J244 114 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 H3BPC8 53 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 EDF1O60869 148 aaKnown RBP1.97□□□□□ -2.09
SNHG1-222ENST00000545308 NPYP01303 97 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 C1QBP02746 253 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 IGKV1-16P04430 117 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 SRP19P09132 144 aaKnown RBP1.97□□□□□ -2.09
SNHG1-222ENST00000545308 UBBP0CG47 229 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 LGALS3P17931 250 aaKnown RBP1.97□□□□□ -2.09
SNHG1-222ENST00000545308 RPL5P46777 297 aaKnown RBP1.97□□□□□ -2.09
SNHG1-222ENST00000545308 XCL1P47992 114 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 POLR2GP62487 172 aaKnown RBP eCLIP1.97□□□□□ -2.09
SNHG1-222ENST00000545308 PIGYQ3MUY2 71 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 HACD4Q5VWC8 232 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 ZNF705AQ6ZN79 300 aaPredicted RBP1.97□□□□□ -2.09
SNHG1-222ENST00000545308 Q6ZS49 121 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 S100A7AQ86SG5 101 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 OR4C16Q8NGL9 310 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 SMCR5Q8TEV8 140 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 C20orf166-AS1Q96NR2 134 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 NIPSNAP1Q9BPW8 284 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 TMEM70Q9BUB7 260 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 DCSTAMPQ9H295 470 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 SMPXQ9UHP9 88 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 TIMM9Q9Y5J7 89 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 DNAH11Q96DT5 4516 aa1.97□□□□□ -2.09
SNHG1-222ENST00000545308 DYNC1H1Q14204 4646 aaKnown RBP1.97□□□□□ -2.09
SNHG1-222ENST00000545308 APOBP04114 4563 aaKnown RBP1.96□□□□□ -2.1
SNHG1-222ENST00000545308 OR2T8A6NH00 312 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 FNDC10F2Z333 226 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 J3QLW9 94 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 ZNF73O43830 326 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-222ENST00000545308 PDE6DO43924 150 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 SMR3BP02814 79 aaPredicted RBP1.96□□□□□ -2.1
SNHG1-222ENST00000545308 DEFB131AP59861 70 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 SNRPD3P62318 126 aaKnown RBP1.96□□□□□ -2.1
SNHG1-222ENST00000545308 HMGN3Q15651 99 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 TDRG1Q3Y452 100 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 CCDC58Q4VC31 144 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 RPL39P5Q59GN2 51 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 ZNF767PQ75MW2 155 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 LHFPL1Q86WI0 220 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 DHFR2Q86XF0 187 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 ACBD7Q8N6N7 88 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 OR10K1Q8NGX5 313 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 OR10J5Q8NHC4 309 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 TMEM147Q9BVK8 224 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 RHPN1-AS1Q9BWJ2 59 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 TTTY10Q9BZA0 68 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 WDR61Q9GZS3 305 aaKnown RBP1.96□□□□□ -2.1
SNHG1-222ENST00000545308 FKBP11Q9NYL4 201 aa1.96□□□□□ -2.1
SNHG1-222ENST00000545308 TRAV9-1A0A075B6T8 112 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 C11orf86A6NJI1 115 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 PRH1P02810 166 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 APELAP0DMC3 54 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 HTN3P15516 51 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 ATP5G3P48201 142 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 EMP1P54849 157 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 ARPC4P59998 168 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 RRN3P1Q2M238 152 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 RPL22L1Q6P5R6 122 aaKnown RBP1.95□□□□□ -2.1
SNHG1-222ENST00000545308 GLIPR1L1Q6UWM5 242 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 TCF24Q7RTU0 167 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 TMEM167AQ8TBQ9 72 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 MRPL30Q8TCC3 161 aaKnown RBP1.95□□□□□ -2.1
SNHG1-222ENST00000545308 GINS4Q9BRT9 223 aa1.95□□□□□ -2.1
SNHG1-222ENST00000545308 C9orf16Q9BUW7 83 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms