RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FAM74A1Q5RGS3 127 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 KRTAP26-1Q6PEX3 210 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 IZUMO2Q6UXV1 221 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 Q6ZVQ6 151 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 C14orf178Q8N769 122 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-220ENST00000544550 DIRC1Q969H9 104 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 CHCHD5Q9BSY4 110 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 NDFIP1Q9BT67 221 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 TREM1Q9NP99 234 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 MCUBQ9NWR8 336 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 RAB26Q9ULW5 256 aa2.47□□□□□ -2.01
SNHG1-220ENST00000544550 TRBV7-3A0A075B6L6 115 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 MUC21A0A0G2JKD1 596 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 SFT2D2O95562 160 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 MT-ND6P03923 174 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 MT3P25713 68 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 S100A4P26447 101 aaKnown RBP2.46□□□□□ -2.02
SNHG1-220ENST00000544550 FAUP35544 74 aaKnown RBP2.46□□□□□ -2.02
SNHG1-220ENST00000544550 UBE2D3P61077 147 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 LSM3P62310 102 aaKnown RBP2.46□□□□□ -2.02
SNHG1-220ENST00000544550 UBE2D2P62837 147 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 REG3AQ06141 175 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 NEDD8Q15843 81 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 UFSP1Q6NVU6 142 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 CLPSL2Q6UWE3 100 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 LINC00269Q8N2A0 174 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 INO80EQ8NBZ0 244 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-220ENST00000544550 CMTM2Q8TAZ6 248 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 SMIM4Q8WVI0 70 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 SLC25A2Q9BXI2 301 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 NMES1Q9C002 83 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 SLIRPQ9GZT3 109 aaKnown RBP2.46□□□□□ -2.02
SNHG1-220ENST00000544550 UQCC1Q9NVA1 299 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 OR5AC2Q9NZP5 309 aa2.46□□□□□ -2.02
SNHG1-220ENST00000544550 A0A096LNI7 61 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 SERTM2A0A1B0GWG4 89 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 ANKRD20A5PA0PJZ0 165 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 F6UZH7 168 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 L7N2F9 121 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 PTTG1O95997 202 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 RNASE3P12724 160 aaKnown RBP2.45□□□□□ -2.02
SNHG1-220ENST00000544550 RAB2AP61019 212 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 RANP62826 216 aaKnown RBP2.45□□□□□ -2.02
SNHG1-220ENST00000544550 BAXQ07812 192 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 C1orf137Q5JT78 98 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 FAM74A4Q5TZK3 123 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 FXYD5Q96DB9 178 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 PHYHIPLQ96FC7 376 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 DIRAS2Q96HU8 199 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 OPRPNQ99935 248 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-220ENST00000544550 SLC25A21Q9BQT8 299 aaPredicted RBP2.45□□□□□ -2.02
SNHG1-220ENST00000544550 MRPS26Q9BYN8 205 aaKnown RBP2.45□□□□□ -2.02
SNHG1-220ENST00000544550 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 Q9H521 79 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 VCX3AQ9NNX9 186 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 Q9UF83 564 aa2.45□□□□□ -2.02
SNHG1-220ENST00000544550 TRBV25-1A0A075B6N4 114 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 UBE2L5PA0A1B0GUS4 154 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 H0Y9J4 135 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 OR7C2O60412 319 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 CRYGAP11844 174 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 S100A11P31949 105 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 BCAP31P51572 246 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 AP3S2P59780 193 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 RBX1P62877 108 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 UBE2L3P68036 154 aaKnown RBP2.44□□□□□ -2.02
SNHG1-220ENST00000544550 HBG1P69891 147 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 HBG2P69892 147 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 PPP1R1AQ13522 171 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 IL18Q14116 193 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 TPRXLQ17RH7 258 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 SPANXN2Q5MJ10 180 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 ZC2HC1BQ5TFG8 222 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 SUN5Q8TC36 379 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 TSKUQ8WUA8 353 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 MITD1Q8WV92 249 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 C11orf52Q96A22 123 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 FAM167A-AS1Q96KT0 104 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 HYLS1Q96M11 299 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 OTORQ9NRC9 128 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 KCNIP2Q9NS61 270 aa2.44□□□□□ -2.02
SNHG1-220ENST00000544550 CARHSP1Q9Y2V2 147 aaKnown RBP2.44□□□□□ -2.02
SNHG1-220ENST00000544550 IGLV7-46A0A075B6I9 117 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 GVQW2A0A096LPI5 108 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-220ENST00000544550 C7orf66A4D0T2 115 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 F8WDY8 70 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 K7EQM0 130 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 RGS5O15539 181 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 GCGP01275 180 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 IGLV7-43P04211 117 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 PVALBP20472 110 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-220ENST00000544550 FGF7P21781 194 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 FHITP49789 147 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 TAS2R45P59539 299 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 NCS1P62166 190 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 RIGQ13278 110 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 ATP6V1FQ16864 119 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 IAH1Q2TAA2 248 aaPredicted RBP2.43□□□□□ -2.02
SNHG1-220ENST00000544550 SMUG1Q53HV7 270 aa2.43□□□□□ -2.02
SNHG1-220ENST00000544550 KHDC3LQ587J8 217 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 179.3 ms