RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 TNP2Q05952 138 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 NANOS2P60321 138 aaKnown RBP5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 C11orf71Q6IPW1 123 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 LYPD6Q86Y78 171 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 C20orf78Q9BR46 151 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 NDUFA7O95182 113 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 EGR2P11161 476 aaPredicted RBP5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 HIST3H2BBQ8N257 126 aa5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 SETD2Q9BYW2 2564 aaPredicted RBP5.31□□□□□ -1.56
SRGAP1-206ENST00000543397 CXCL5P42830 114 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 XCL1P47992 114 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 HERVK_113P63121 156 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 UBE2BP63146 152 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 DEFB4AO15263 64 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 V9GYV3 84 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 C18orf32Q8TCD1 76 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 LINC00694P0DN24 101 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 FN1P02751 2386 aaKnown RBP5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 TRAV8-3A0A0A6YYJ7 113 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 TRBV12-3P01733 135 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 UNQ9165/PRO28630Q6UXU0 137 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 ZNF664Q8N3J9 261 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 OVOL2Q9BRP0 275 aa5.3□□□□□ -1.56
SRGAP1-206ENST00000543397 NPYP01303 97 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 Q6ZSV7 163 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 TNRC6AQ8NDV7 1962 aaKnown RBP5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 C9JQL5 133 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 DEFB125Q8N687 156 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 YPEL4Q96NS1 127 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 K7EQD1 137 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 WI2-2373I1.2A0A1W2PRP0 233 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 IGLL5B9A064 214 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 KIAA1549LQ6ZVL6 1849 aa5.29□□□□□ -1.56
SRGAP1-206ENST00000543397 SMIM27A0A1W2PRY6 76 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 IGHV3-30P01768 117 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 IGHV3-33P01772 117 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 IGHV3-30-3P0DP02 117 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 IGHV3-30-5P0DP03 117 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 PATE2Q6UY27 113 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 NDUFA12Q9UI09 145 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 E7EUB6 86 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 INAFM2P0DMQ5 153 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 Q0VG73 95 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 RNASE13Q5GAN3 156 aaKnown RBP5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 LINC00574Q9H8X3 128 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 C10orf142B7Z368 130 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 FAM222AQ5U5X8 452 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 Q6ZVQ6 151 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 HHLA3Q9XRX5 114 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 EPG5Q9HCE0 2579 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 IGKV2-29A2NJV5 120 aaPredicted RBP5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 LINC01548A6NM66 108 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 ADCYAP1P18509 176 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 COX8CQ7Z4L0 72 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 Q8N1Y9 231 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 TM2D2Q9BX73 214 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 C11orf45Q8TAV5 145 aa5.28□□□□□ -1.56
SRGAP1-206ENST00000543397 AMTNQ6UX39 209 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 STPG4Q8N801 248 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 PCNX3Q9H6A9 2034 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 FAM236AA0A1B0GUQ0 79 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 FAM236BA0A1B0GV22 79 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 PRYO14603 147 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 DAZ2Q13117 558 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 DAZ4Q86SG3 579 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 MAP6D1Q9H9H5 199 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 DAZ3Q9NR90 486 aaKnown RBP5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 KMT2EQ8IZD2 1858 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 IGLV10-54A0A075B6I4 117 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 PLAC8L1A1L4L8 177 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 Q6ZWC4 215 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 C9orf47Q6ZRZ4 202 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 CAMK2N2Q96S95 79 aa5.27□□□□□ -1.57
SRGAP1-206ENST00000543397 A0A0J9YX75 114 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 PRAC2D3DTV9 90 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 F8VRH5 84 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 HILS1P60008 231 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 TMEM263Q8WUH6 116 aaKnown RBP5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 A6NED7 52 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 TAX1BP3O14907 124 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 IGLL1P15814 213 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 C5orf38Q86SI9 138 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 MRPL36Q9P0J6 103 aaKnown RBP5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 K7EMI3 77 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 IGLC6P0CF74 106 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 ZNF106Q9H2Y7 1883 aaKnown RBP5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 DEFB1P60022 68 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 CDSNQ15517 529 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 PRO0255Q9UI72 69 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 IGLV2-14P01704 120 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 MP68P56378 58 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 MRPL35Q9NZE8 188 aaKnown RBP5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 X6R8D5 127 aa5.26□□□□□ -1.57
SRGAP1-206ENST00000543397 SUMO4Q6EEV6 95 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 LGALS9O00182 355 aa5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 RPL18AQ02543 176 aaKnown RBP5.25□□□□□ -1.57
SRGAP1-206ENST00000543397 REG3AQ06141 175 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms