RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 CRYGBP07316 175 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 ABCA12Q86UK0 2595 aa8.58□□□□□ -1.04
CDH4-201ENST00000543233 ATP5G1P05496 136 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 CRYGDP07320 174 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 P0DMU3 169 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 LGALS3P17931 250 aaKnown RBP8.57□□□□□ -1.04
CDH4-201ENST00000543233 VMO1Q7Z5L0 202 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 FASNP49327 2511 aaKnown RBP8.57□□□□□ -1.04
CDH4-201ENST00000543233 SETD2Q9BYW2 2564 aaPredicted RBP8.57□□□□□ -1.04
CDH4-201ENST00000543233 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 J3QQQ9 107 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 IGKV1-17P01599 117 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 COX6CP09669 75 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 RHOHQ15669 191 aa8.57□□□□□ -1.04
CDH4-201ENST00000543233 PTPN13Q12923 2485 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 IGHV3OR16-13A0A075B7E8 117 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 IGHV3-74A0A0B4J1X5 117 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 TRGV3P03979 118 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 NDPQ00604 133 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 IGFL4Q6B9Z1 124 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 LINC00643Q86TS7 51 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 SMCR5Q8TEV8 140 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 TRAV12-1A0A0B4J245 112 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 H3BT86 120 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 I3L2K1 104 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 K7EIM0 57 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 PRSS2P07478 247 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 ECSCRQ19T08 205 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 C1orf195Q5TG92 126 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 MUSTN1Q8IVN3 82 aa8.56□□□□□ -1.04
CDH4-201ENST00000543233 COX6B1P14854 86 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 ERCC8Q13216 396 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 TMEM263Q8WUH6 116 aaKnown RBP8.55□□□□□ -1.04
CDH4-201ENST00000543233 PEMTQ9UBM1 199 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 LY6LH3BQJ8 138 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 PRB1P04280 392 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 FBXL19-AS1Q494R0 122 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 SLC25A29Q8N8R3 303 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 C2orf48Q96LS8 159 aa8.55□□□□□ -1.04
CDH4-201ENST00000543233 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 C19orf84I3L1E1 186 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 GNLYP22749 145 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 IGHV3-66A0A0C4DH42 116 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 NPC2P61916 151 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 CIRBPQ14011 172 aaKnown RBP8.54□□□□□ -1.04
CDH4-201ENST00000543233 NEXN-AS1Q8NBZ9 246 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 BRK1Q8WUW1 75 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 BPESC1Q9GZL8 116 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 IGLV2-18A0A075B6J9 118 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 TRBV19A0A075B6N1 114 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 IGHV3-49A0A0A0MS15 119 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 SYNJ2BPP57105 145 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 TSPEAR-AS2P59090 65 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 TMEM86BQ8N661 226 aa8.54□□□□□ -1.04
CDH4-201ENST00000543233 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
CDH4-201ENST00000543233 C2orf66Q6UXQ4 117 aa8.53□□□□□ -1.04
CDH4-201ENST00000543233 RNF125Q96EQ8 232 aa8.53□□□□□ -1.04
CDH4-201ENST00000543233 SHANK2-AS3Q9BTD1 123 aa8.53□□□□□ -1.04
CDH4-201ENST00000543233 EIF4EBP3O60516 100 aaPredicted RBP8.53□□□□□ -1.04
CDH4-201ENST00000543233 ZNF80P51504 273 aaPredicted RBP8.53□□□□□ -1.04
CDH4-201ENST00000543233 LY6G5BQ8NDX9 201 aa8.53□□□□□ -1.04
CDH4-201ENST00000543233 UBE2E1P51965 193 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 C11orf71Q6IPW1 123 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 SPANXDQ9BXN6 97 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 ICOSQ9Y6W8 199 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
CDH4-201ENST00000543233 LINC01546A6NGU7 62 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 AGPAT4-IT1Q9H0P7 198 aa8.52□□□□□ -1.05
CDH4-201ENST00000543233 ACYP1P07311 99 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 HOXB4P17483 251 aaPredicted RBP8.51□□□□□ -1.05
CDH4-201ENST00000543233 ZNF491Q8N8L2 437 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 DOPEY1Q5JWR5 2465 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 SPANXN1Q5VSR9 72 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 MYO9AB2RTY4 2548 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 A0A0B4J2C4 111 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 IGKV3D-7A0A0C4DH55 119 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 ORMDL2Q53FV1 153 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 FANCD2OSQ96PS1 177 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 CCDC168Q8NDH2 2452 aa8.51□□□□□ -1.05
CDH4-201ENST00000543233 SONP18583 2426 aaKnown RBP8.5□□□□□ -1.05
CDH4-201ENST00000543233 G3V318 75 aa8.5□□□□□ -1.05
CDH4-201ENST00000543233 TRBV6-1A0A0K0K1D8 114 aa8.5□□□□□ -1.05
CDH4-201ENST00000543233 BRD3OSQ6XYD6 125 aa8.5□□□□□ -1.05
CDH4-201ENST00000543233 Q6ZSV7 163 aa8.5□□□□□ -1.05
CDH4-201ENST00000543233 SAA4P35542 130 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 C9orf85Q96MD7 179 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 A0A1W2PRX2 142 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 RPL18AQ02543 176 aaKnown RBP8.49□□□□□ -1.05
CDH4-201ENST00000543233 C16orf92Q96LL3 132 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 TRBV7-1A0A0A6YYK4 115 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 ODF3BA8MYP8 253 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 M0R1W7 72 aa8.49□□□□□ -1.05
CDH4-201ENST00000543233 SERP2Q8N6R1 65 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms