RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PMCHL1Q16048 86 aa19.81■□□□□ 0.76
CCM2-218ENST00000541586 RHODO00212 210 aa19.8■□□□□ 0.76
CCM2-218ENST00000541586 SUMO2P61956 95 aaKnown RBP19.8■□□□□ 0.76
CCM2-218ENST00000541586 C20orf78Q9BR46 151 aa19.8■□□□□ 0.76
CCM2-218ENST00000541586 NXT2Q9NPJ8 142 aaKnown RBP19.8■□□□□ 0.76
CCM2-218ENST00000541586 IGLV2-18A0A075B6J9 118 aa19.79■□□□□ 0.76
CCM2-218ENST00000541586 IGHV1-24A0A0C4DH33 117 aa19.79■□□□□ 0.76
CCM2-218ENST00000541586 IGHV4-28A0A0C4DH34 117 aa19.79■□□□□ 0.76
CCM2-218ENST00000541586 MIFP14174 115 aa19.79■□□□□ 0.76
CCM2-218ENST00000541586 Q8N8P6 123 aa19.79■□□□□ 0.76
CCM2-218ENST00000541586 OR4C5Q8NGB2 326 aa19.79■□□□□ 0.76
CCM2-218ENST00000541586 Q8NAQ8 132 aa19.78■□□□□ 0.76
CCM2-218ENST00000541586 A0A0J9YWU9 116 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 GAGE12BA1L429 117 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 GAGE7O76087 117 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 GAGE12FP0CL80 117 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 GAGE12GP0CL81 117 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 GAGE12IP0CL82 117 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 ZFP2Q6ZN57 461 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 SMIM2Q9BVW6 85 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 TGP01266 2768 aa19.77■□□□□ 0.76
CCM2-218ENST00000541586 LINC01546A6NGU7 62 aa19.76■□□□□ 0.75
CCM2-218ENST00000541586 Q6ZSN1 163 aa19.76■□□□□ 0.75
CCM2-218ENST00000541586 EDA2RQ9HAV5 297 aa19.76■□□□□ 0.75
CCM2-218ENST00000541586 TRAV4A0A0B4J268 109 aa19.76■□□□□ 0.75
CCM2-218ENST00000541586 ZNF479Q96JC4 524 aa19.76■□□□□ 0.75
CCM2-218ENST00000541586 ST20Q9HBF5 79 aa19.76■□□□□ 0.75
CCM2-218ENST00000541586 H7C1H1 209 aa19.74■□□□□ 0.75
CCM2-218ENST00000541586 TRGV2A0A075B6R0 118 aa19.73■□□□□ 0.75
CCM2-218ENST00000541586 TRBV6-5A0A0K0K1A5 114 aa19.73■□□□□ 0.75
CCM2-218ENST00000541586 NIT2Q9NQR4 276 aa19.73■□□□□ 0.75
CCM2-218ENST00000541586 IGHV3-53P01767 116 aa19.73■□□□□ 0.75
CCM2-218ENST00000541586 P0DMU3 169 aa19.72■□□□□ 0.75
CCM2-218ENST00000541586 FAM231AP0DMU4 169 aa19.72■□□□□ 0.75
CCM2-218ENST00000541586 FAM231CP0DMU5 169 aa19.72■□□□□ 0.75
CCM2-218ENST00000541586 POLR2KP53803 58 aaKnown RBP19.71■□□□□ 0.75
CCM2-218ENST00000541586 TMEM70Q9BUB7 260 aa19.71■□□□□ 0.75
CCM2-218ENST00000541586 A0A096LNJ9 63 aa19.71■□□□□ 0.75
CCM2-218ENST00000541586 TCAPO15273 167 aa19.71■□□□□ 0.75
CCM2-218ENST00000541586 RPL32P62910 135 aaKnown RBP19.71■□□□□ 0.75
CCM2-218ENST00000541586 LINC00612Q8N6U2 182 aa19.71■□□□□ 0.75
CCM2-218ENST00000541586 SDHAF1A6NFY7 115 aa19.7■□□□□ 0.74
CCM2-218ENST00000541586 NEGR1Q7Z3B1 354 aa19.69■□□□□ 0.74
CCM2-218ENST00000541586 DEFB130BP0DP73 79 aa19.68■□□□□ 0.74
CCM2-218ENST00000541586 DEFB130AP0DP74 79 aa19.68■□□□□ 0.74
CCM2-218ENST00000541586 Q9UF83 564 aa19.68■□□□□ 0.74
CCM2-218ENST00000541586 LEPROTL1O95214 131 aa19.68■□□□□ 0.74
CCM2-218ENST00000541586 LAGE3Q14657 143 aa19.68■□□□□ 0.74
CCM2-218ENST00000541586 PYY3Q5JQD4 70 aa19.68■□□□□ 0.74
CCM2-218ENST00000541586 C11orf68Q9H3H3 251 aaKnown RBP19.68■□□□□ 0.74
CCM2-218ENST00000541586 LYRM9A8MSI8 78 aa19.67■□□□□ 0.74
CCM2-218ENST00000541586 FAM222AQ5U5X8 452 aa19.67■□□□□ 0.74
CCM2-218ENST00000541586 VCYO14598 125 aa19.66■□□□□ 0.74
CCM2-218ENST00000541586 HBDP02042 147 aa19.66■□□□□ 0.74
CCM2-218ENST00000541586 TRBV27A0A0K0K1C4 114 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 CIDEAO60543 219 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 LINC00173Q6ZV60 143 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 CELA1Q9UNI1 258 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 SMIM6P0DI80 62 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 FCER1GP30273 86 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 NEXN-AS1Q8NBZ9 246 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 C18orf15Q96N68 181 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 DKK2Q9UBU2 259 aa19.65■□□□□ 0.74
CCM2-218ENST00000541586 K7EMI3 77 aa19.64■□□□□ 0.73
CCM2-218ENST00000541586 KRTDAPP60985 99 aa19.64■□□□□ 0.73
CCM2-218ENST00000541586 TNFRSF18Q9Y5U5 241 aa19.64■□□□□ 0.73
CCM2-218ENST00000541586 JOSD1Q15040 202 aaPredicted RBP19.63■□□□□ 0.73
CCM2-218ENST00000541586 C3orf79P0CE67 100 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 ORMDL2Q53FV1 153 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 LINC00518Q8N0U6 118 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 KIR2DL4Q99706 377 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 STAB2Q8WWQ8 2551 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 K7EQD1 137 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 SPART-AS1P0CW21 52 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 SLC25A29Q8N8R3 303 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 C11orf45Q8TAV5 145 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 DEFB104AQ8WTQ1 72 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 HSPB8Q9UJY1 196 aa19.62■□□□□ 0.73
CCM2-218ENST00000541586 DNAJC30Q96LL9 226 aa19.61■□□□□ 0.73
CCM2-218ENST00000541586 TRGV4A0A0C4DH28 118 aa19.6■□□□□ 0.73
CCM2-218ENST00000541586 NUDT3O95989 172 aa19.6■□□□□ 0.73
CCM2-218ENST00000541586 BTF3P20290 206 aaKnown RBP19.59■□□□□ 0.73
CCM2-218ENST00000541586 NANOS2P60321 138 aaKnown RBP19.59■□□□□ 0.73
CCM2-218ENST00000541586 FHL2Q14192 279 aa19.59■□□□□ 0.73
CCM2-218ENST00000541586 I3L3M4 83 aa19.59■□□□□ 0.73
CCM2-218ENST00000541586 C12orf57Q99622 126 aa19.59■□□□□ 0.73
CCM2-218ENST00000541586 TRBV10-1A0A0K0K1A3 114 aa19.58■□□□□ 0.72
CCM2-218ENST00000541586 TRBV6-4A0A1B0GX49 114 aa19.56■□□□□ 0.72
CCM2-218ENST00000541586 SCGB1D1O95968 90 aa19.56■□□□□ 0.72
CCM2-218ENST00000541586 TSHBP01222 138 aa19.56■□□□□ 0.72
CCM2-218ENST00000541586 DAD1P61803 113 aa19.55■□□□□ 0.72
CCM2-218ENST00000541586 CDPF1Q6NVV7 123 aa19.55■□□□□ 0.72
CCM2-218ENST00000541586 ZNRF2Q8NHG8 242 aa19.55■□□□□ 0.72
CCM2-218ENST00000541586 TRBV7-3A0A075B6L6 115 aa19.54■□□□□ 0.72
CCM2-218ENST00000541586 C12orf74Q32Q52 190 aa19.54■□□□□ 0.72
CCM2-218ENST00000541586 MAP1LC3CQ9BXW4 147 aa19.54■□□□□ 0.72
CCM2-218ENST00000541586 RPL36AP83881 106 aaKnown RBP19.54■□□□□ 0.72
CCM2-218ENST00000541586 Q8N976 141 aa19.54■□□□□ 0.72
CCM2-218ENST00000541586 RPL36ALQ969Q0 106 aaKnown RBP19.54■□□□□ 0.72
CCM2-218ENST00000541586 TEX48A0A1B0GUV7 120 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms