RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 A0A1W2PPB8 328 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 A0A1W2PPM0 123 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 A0A1W2PRS3 328 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 KIR3DP1A8MWS1 328 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 E7EUB6 86 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 C17orf112F2Z3M2 114 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 M0R2T5 61 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 NCR3O14931 201 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 HMGB3O15347 200 aaKnown RBP0.46□□□□□ -2.34
PRKDC-210ENST00000541488 HSD11B1P28845 292 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 SERPINB9P50453 376 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 DSCR4P56555 118 aaPredicted RBP0.46□□□□□ -2.34
PRKDC-210ENST00000541488 ROMO1P60602 79 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 PLGLB1Q02325 96 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 DEFB110Q30KQ9 67 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 C1orf134Q5TEV5 83 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 ZCCHC23Q6ZST2 131 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 ZNF833PQ6ZTB9 187 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 NDUFA11Q86Y39 141 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 TEX29Q8N6K0 151 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 STAG3L4Q8TBR4 150 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 ZNF431Q8TF32 576 aaPredicted RBP0.46□□□□□ -2.34
PRKDC-210ENST00000541488 LINC00052Q96N35 136 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 SPRR2FQ96RM1 72 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 C9orf16Q9BUW7 83 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 LINC00846Q9NV44 126 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 FAIMQ9NVQ4 179 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 ARL5AQ9Y689 179 aa0.46□□□□□ -2.34
PRKDC-210ENST00000541488 A0A087WSZ3 146 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 TRAV10A0A0B4J240 114 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 M0R378 163 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 AIPO00170 330 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 DNAL4O96015 105 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 C1QBP02746 253 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 OR10J4P0C629 311 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 CAPZBP47756 277 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 ARF6P62330 175 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 SPCS2Q15005 226 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 TAF1AQ15573 450 aaPredicted RBP0.45□□□□□ -2.34
PRKDC-210ENST00000541488 SCGB2B2Q4G0G5 96 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 EIF5AL1Q6IS14 154 aaKnown RBP0.45□□□□□ -2.34
PRKDC-210ENST00000541488 Q8N6K4 173 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 OR5D14Q8NGL3 314 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 LYSMD1Q96S90 227 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 PHB2Q99623 299 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 CBLN4Q9NTU7 201 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 PCTPQ9UKL6 214 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 PYCARDQ9ULZ3 195 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 TNFSF18Q9UNG2 199 aa0.45□□□□□ -2.34
PRKDC-210ENST00000541488 E7EQ34 232 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 ERC2-IT1O76042 136 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 NDUFC2O95298 119 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 CXCL8P10145 99 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 DYNLT3P51808 116 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 NCALDP61601 193 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 SPRNQ5BIV9 151 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 NCMAPQ5T1S8 102 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 KRTAP26-1Q6PEX3 210 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 HAGHLQ6PII5 290 aaPredicted RBP0.44□□□□□ -2.34
PRKDC-210ENST00000541488 TEN1Q86WV5 123 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 DEFB108BQ8NET1 73 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 PXT1Q8NFP0 134 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 MUCL1Q96DR8 90 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 NPCDR1Q9BY65 106 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 PBOV1Q9GZY1 135 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 TAS2R7Q9NYW3 318 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 APLNQ9ULZ1 77 aa0.44□□□□□ -2.34
PRKDC-210ENST00000541488 DUXBA0A1W2PPF3 345 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 G3V2T6 193 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 H3BRM9 83 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 H3BSH0 61 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 TMEM256-PLSCR3K7ERE1 68 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 CST8O60676 142 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 IGF2P01344 180 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 COX7CP15954 63 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 DCDP81605 110 aaKnown RBP0.43□□□□□ -2.34
PRKDC-210ENST00000541488 MRPS15P82914 257 aaKnown RBP0.43□□□□□ -2.34
PRKDC-210ENST00000541488 CDK6Q00534 326 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 KRTAP19-2Q3LHN2 52 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 LINC00575Q6W349 94 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 UBE2DNLQ8IWF7 75 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 OR5AS1Q8N127 324 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 OR5D16Q8NGK9 328 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 POP5Q969H6 163 aaKnown RBP0.43□□□□□ -2.34
PRKDC-210ENST00000541488 CCDC94Q9BW85 323 aaPredicted RBP0.43□□□□□ -2.34
PRKDC-210ENST00000541488 OR52A1Q9UKL2 312 aa0.43□□□□□ -2.34
PRKDC-210ENST00000541488 TRAV27A0A087WT01 109 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 UQCRHLA0A096LP55 91 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 F8W1H4 67 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 M0R233 179 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 BANF1O75531 89 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 ATP5HO75947 161 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 ATG12O94817 140 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 APOA2P02652 100 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 NFYBP25208 207 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 RAB5CP51148 216 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 DEFB136Q30KP8 78 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 AKR1C8PQ5T2L2 129 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 DHRS4L2Q6PKH6 230 aa0.42□□□□□ -2.34
PRKDC-210ENST00000541488 C10orf99Q6UWK7 81 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms