RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 NLRC5Q86WI3 1866 aa11.87□□□□□ -0.51
HMGA2-210ENST00000541363 A0A096LNI7 61 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 FHL1Q13642 323 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 DEFB135Q30KP9 77 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 UBE2D4Q9Y2X8 147 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 C1orf195Q5TG92 126 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 NUP210Q8TEM1 1887 aaPredicted RBP11.86□□□□□ -0.51
HMGA2-210ENST00000541363 TCL1BO95988 128 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 Q8N9L7 120 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 C20orf173Q96LM9 149 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 AJUBAQ96IF1 538 aa11.86□□□□□ -0.51
HMGA2-210ENST00000541363 LYRM9A8MSI8 78 aa11.85□□□□□ -0.51
HMGA2-210ENST00000541363 SMAD5-AS1Q9Y6J3 95 aa11.85□□□□□ -0.51
HMGA2-210ENST00000541363 C7orf33Q8WU49 177 aa11.85□□□□□ -0.51
HMGA2-210ENST00000541363 MGAMO43451 1857 aa11.85□□□□□ -0.51
HMGA2-210ENST00000541363 LINC00173Q6ZV60 143 aa11.85□□□□□ -0.51
HMGA2-210ENST00000541363 PRR14LQ5THK1 2151 aa11.84□□□□□ -0.51
HMGA2-210ENST00000541363 PRSS33Q8NF86 280 aa11.84□□□□□ -0.51
HMGA2-210ENST00000541363 CENPVL3A0A0U1RRI6 287 aa11.84□□□□□ -0.51
HMGA2-210ENST00000541363 SERP2Q8N6R1 65 aa11.84□□□□□ -0.51
HMGA2-210ENST00000541363 SIP14410 1827 aa11.84□□□□□ -0.51
HMGA2-210ENST00000541363 DEFB113Q30KQ7 82 aa11.84□□□□□ -0.51
HMGA2-210ENST00000541363 C2orf70A6NJV1 201 aa11.84□□□□□ -0.51
HMGA2-210ENST00000541363 C4orf3Q8WVX3 66 aa11.83□□□□□ -0.51
HMGA2-210ENST00000541363 MDFICQ9P1T7 246 aa11.83□□□□□ -0.51
HMGA2-210ENST00000541363 ROS1P08922 2347 aa11.83□□□□□ -0.52
HMGA2-210ENST00000541363 DEFB4AO15263 64 aa11.83□□□□□ -0.52
HMGA2-210ENST00000541363 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.52
HMGA2-210ENST00000541363 C17orf82Q86X59 251 aaPredicted RBP11.83□□□□□ -0.52
HMGA2-210ENST00000541363 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
HMGA2-210ENST00000541363 PRO0255Q9UI72 69 aa11.83□□□□□ -0.52
HMGA2-210ENST00000541363 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
HMGA2-210ENST00000541363 ACACAQ13085 2346 aa11.83□□□□□ -0.52
HMGA2-210ENST00000541363 IGLV1-44P01699 117 aa11.82□□□□□ -0.52
HMGA2-210ENST00000541363 C11orf45Q8TAV5 145 aa11.82□□□□□ -0.52
HMGA2-210ENST00000541363 TRBV6-1A0A0K0K1D8 114 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 CACNA1EQ15878 2313 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 TIMM17BO60830 172 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 ODF1Q14990 250 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 MSRB1Q9NZV6 116 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 ZNF706Q9Y5V0 76 aaPredicted RBP11.81□□□□□ -0.52
HMGA2-210ENST00000541363 UBE2D3P61077 147 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 PTH2Q96A98 100 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 RETNQ9HD89 108 aa11.81□□□□□ -0.52
HMGA2-210ENST00000541363 CRYGDP07320 174 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 BLCAPP62952 87 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 PRR4Q16378 134 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 COA6Q5JTJ3 125 aaKnown RBP11.8□□□□□ -0.52
HMGA2-210ENST00000541363 CDPF1Q6NVV7 123 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 ADAMTS9Q9P2N4 1935 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 I3L2K1 104 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 BRWD3Q6RI45 1802 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 LOXL1Q08397 574 aaPredicted RBP11.8□□□□□ -0.52
HMGA2-210ENST00000541363 ZFAND2AQ8N6M9 145 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 Q8NFD4 153 aa11.8□□□□□ -0.52
HMGA2-210ENST00000541363 LINC00269Q8N2A0 174 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 WNK1Q9H4A3 2382 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 REG3AQ06141 175 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 IGLV11-55A0A075B6I3 123 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 IGHV7-81A0A0B4J1V7 117 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 IGHV4-30-4P0DP06 118 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 IGHV4-31P0DP07 118 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 WT1P19544 449 aaPredicted RBP11.79□□□□□ -0.52
HMGA2-210ENST00000541363 SNURFQ9Y675 71 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 TRBV10-1A0A0K0K1A3 114 aa11.79□□□□□ -0.52
HMGA2-210ENST00000541363 MYCNOSP40205 109 aa11.78□□□□□ -0.52
HMGA2-210ENST00000541363 CTRLP40313 264 aa11.78□□□□□ -0.52
HMGA2-210ENST00000541363 IGHV4-38-2P0DP08 117 aa11.78□□□□□ -0.52
HMGA2-210ENST00000541363 TDRG1Q3Y452 100 aa11.78□□□□□ -0.52
HMGA2-210ENST00000541363 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
HMGA2-210ENST00000541363 C5orf56Q8N8D9 126 aa11.78□□□□□ -0.52
HMGA2-210ENST00000541363 ZNF106Q9H2Y7 1883 aaKnown RBP11.78□□□□□ -0.52
HMGA2-210ENST00000541363 K7EMT4 169 aa11.78□□□□□ -0.52
HMGA2-210ENST00000541363 Q6ZVQ6 151 aa11.77□□□□□ -0.52
HMGA2-210ENST00000541363 SPINK6Q6UWN8 80 aa11.77□□□□□ -0.53
HMGA2-210ENST00000541363 H7C423 109 aa11.77□□□□□ -0.53
HMGA2-210ENST00000541363 MT-ATP8P03928 68 aa11.77□□□□□ -0.53
HMGA2-210ENST00000541363 CNOT1A5YKK6 2376 aaKnown RBP11.77□□□□□ -0.53
HMGA2-210ENST00000541363 PRYO14603 147 aa11.77□□□□□ -0.53
HMGA2-210ENST00000541363 INSL3P51460 131 aa11.77□□□□□ -0.53
HMGA2-210ENST00000541363 C3orf84H3BNL1 204 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 FAM222AQ5U5X8 452 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 K7EIM0 57 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 CCKP06307 115 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 A0A0J9YXY3 114 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
HMGA2-210ENST00000541363 HRCT1Q6UXD1 115 aa11.75□□□□□ -0.53
HMGA2-210ENST00000541363 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
HMGA2-210ENST00000541363 TANC1Q9C0D5 1861 aa11.75□□□□□ -0.53
HMGA2-210ENST00000541363 NDUFA7O95182 113 aa11.74□□□□□ -0.53
HMGA2-210ENST00000541363 SLPIP03973 132 aa11.74□□□□□ -0.53
HMGA2-210ENST00000541363 LYPD6BQ8NI32 183 aa11.74□□□□□ -0.53
HMGA2-210ENST00000541363 CRIPAKQ8N1N5 446 aa11.74□□□□□ -0.53
HMGA2-210ENST00000541363 CACNA1GO43497 2377 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms