RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 A8MWV9 139 aa7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 TCRAP04437 139 aa7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 RNASE3P12724 160 aaKnown RBP7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 ZNF80P51504 273 aaPredicted RBP7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 GNG5P63218 68 aa7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 DGAT2L7PQ6IED9 249 aa7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 SVBPQ8N300 66 aa7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 DERL1Q9BUN8 251 aa7.47□□□□□ -1.21
CLSTN3-209ENST00000539982 SERTM2A0A1B0GWG4 89 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 K7EQM0 130 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 S100A9P06702 114 aaKnown RBP7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 RPL35P42766 123 aaKnown RBP7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 TMEM241Q24JQ0 296 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 PIK3CD-AS1Q5SR53 167 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 KCNIP4Q6PIL6 250 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 C14orf178Q8N769 122 aaPredicted RBP7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 C9orf163Q8N9P6 203 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 SGK494Q96LW2 274 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 NDFIP1Q9BT67 221 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 C1orf43Q9BWL3 253 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 NAT8Q9UHE5 227 aa7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.46□□□□□ -1.22
CLSTN3-209ENST00000539982 SNAPINO95295 136 aa7.45□□□□□ -1.22
CLSTN3-209ENST00000539982 PNRC1Q12796 327 aaPredicted RBP7.45□□□□□ -1.22
CLSTN3-209ENST00000539982 DMRTA1Q5VZB9 504 aa7.45□□□□□ -1.22
CLSTN3-209ENST00000539982 UFSP1Q6NVU6 142 aa7.45□□□□□ -1.22
CLSTN3-209ENST00000539982 TMEM75Q8N9X5 138 aa7.45□□□□□ -1.22
CLSTN3-209ENST00000539982 TNXBP22105 4242 aa7.45□□□□□ -1.22
CLSTN3-209ENST00000539982 TRAV34A0A0B4J273 112 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 PANO1I0J062 215 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 M0R036 132 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 GCGP01275 180 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 PRSS1P07477 247 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 GNG4P50150 75 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 UBE2G1P62253 170 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 CENPWQ5EE01 88 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 SDIM1Q6ZPB5 146 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 CLRN3Q8NCR9 226 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 ZC2HC1AQ96GY0 325 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 FMC1Q96HJ9 113 aa7.44□□□□□ -1.22
CLSTN3-209ENST00000539982 TRBV20OR9-2A0A075B6H5 130 aa7.43□□□□□ -1.22
CLSTN3-209ENST00000539982 TRBV6-1A0A0K0K1D8 114 aa7.43□□□□□ -1.22
CLSTN3-209ENST00000539982 RPL23P62829 140 aaKnown RBP7.43□□□□□ -1.22
CLSTN3-209ENST00000539982 BAGE2Q86Y30 109 aa7.43□□□□□ -1.22
CLSTN3-209ENST00000539982 DPH3P1Q9H4G8 78 aa7.43□□□□□ -1.22
CLSTN3-209ENST00000539982 JPT2Q9H910 190 aa7.43□□□□□ -1.22
CLSTN3-209ENST00000539982 B4DEV8 164 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 TMEM262E9PQX1 116 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 S100A4P26447 101 aaKnown RBP7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 RHEBQ15382 184 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 ADIRFQ15847 76 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 SMUG1Q53HV7 270 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 Q86TA4 180 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 LINC01551Q86U37 167 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 OCC1Q8TAD7 63 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 SMIM12Q96EX1 92 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 PSG8Q9UQ74 426 aa7.42□□□□□ -1.22
CLSTN3-209ENST00000539982 RHODO00212 210 aa7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 LTAP01374 205 aa7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 CRPP02741 224 aa7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 RPL19P84098 196 aaKnown RBP7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 FLI1Q01543 452 aaPredicted RBP7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 CIRBPQ14011 172 aaKnown RBP7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 PRNTQ86SH4 94 aa7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 LINC01600Q96MT4 127 aa7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 ZFP30Q9Y2G7 519 aa7.41□□□□□ -1.22
CLSTN3-209ENST00000539982 IGKV3D-20A0A0C4DH25 116 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 C7orf77A4D0Y5 90 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 HLA-DQA1P01909 254 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 C15orf54Q8N8G6 183 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 ISOC2Q96AB3 205 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 DPH3Q96FX2 82 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 RPS10P5Q9NQ39 176 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 IL36BQ9NZH7 164 aa7.4□□□□□ -1.22
CLSTN3-209ENST00000539982 K7EN84 100 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 MT-ND4LP03901 98 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 UBE2D3P61077 147 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 UBE2D2P62837 147 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 MIAQ16674 131 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 SAPCD1Q5SSQ6 148 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 MLST8Q9BVC4 326 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
CLSTN3-209ENST00000539982 TRBV7-3A0A075B6L6 115 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 TRBV6-8A0A0A6YYG3 113 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 TRBV10-1A0A0K0K1A3 114 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 FABP5P3A8MUU1 101 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 SCO1O75880 301 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 ANGP03950 147 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 RPL36AP83881 106 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 FAM74A4Q5TZK3 123 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 RPL36ALQ969Q0 106 aaKnown RBP7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 RNF185Q96GF1 192 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 SFRP2Q96HF1 295 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 CTDSP1Q9GZU7 261 aa7.38□□□□□ -1.23
CLSTN3-209ENST00000539982 A0A087WWL8 130 aa7.37□□□□□ -1.23
CLSTN3-209ENST00000539982 A0A087WYN8 130 aa7.37□□□□□ -1.23
CLSTN3-209ENST00000539982 PPP1R2P9O14990 202 aa7.37□□□□□ -1.23
CLSTN3-209ENST00000539982 GAS8-AS1O95177 125 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms