RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 KTN1-AS1Q86SY8 53 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 C20orf203Q8NBC4 194 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 LY6G5BQ8NDX9 201 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 Q8TAT8 98 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 DEFB118Q96PH6 123 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 TM2D3Q9BRN9 247 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 C11orf21Q9P2W6 132 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 SPRR3Q9UBC9 169 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 KIF25-AS1Q9Y6Z4 181 aa4.5□□□□□ -1.69
SNHG1-211ENST00000539921 RANBP2P49792 3224 aaKnown RBP4.5□□□□□ -1.69
SNHG1-211ENST00000539921 DSCAML1Q8TD84 2053 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 CACNA1DQ01668 2161 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 A0A087WVE0 104 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 TRBV7-4A0A0J9YYF1 115 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 F8WEM9 126 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 H3BQ85 93 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 M0R1B8 84 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 IGLV1-44P01699 117 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 FOLR3P41439 243 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 LINC00315P59091 139 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 HCP5Q6MZN7 132 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 LINC00308Q8TCZ7 52 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 RPL39LQ96EH5 51 aaKnown RBP4.49□□□□□ -1.69
SNHG1-211ENST00000539921 LINC00167Q96N53 147 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 GAFA1Q96PS6 74 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 X6R8D5 127 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 CEP290O15078 2479 aa4.49□□□□□ -1.69
SNHG1-211ENST00000539921 IGLV4-3A0A075B6K6 122 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 IGHV1-3A0A0C4DH29 117 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 E7EQL1 145 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 IGHV3-48P01763 117 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 IGHV3-9P01782 118 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 PDE6GP18545 87 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 RUSC1-AS1Q66K80 236 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 PMS2CLQ68D20 193 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 ZNRF1Q8ND25 227 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 LINC01560Q8TB33 94 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 HES7Q9BYE0 225 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 C11orf68Q9H3H3 251 aaKnown RBP4.48□□□□□ -1.69
SNHG1-211ENST00000539921 PHLDA3Q9Y5J5 127 aa4.48□□□□□ -1.69
SNHG1-211ENST00000539921 INTS1Q8N201 2190 aaKnown RBP4.48□□□□□ -1.69
SNHG1-211ENST00000539921 LAMA3Q16787 3333 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 DSCAMO60469 2012 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 IGLV11-55A0A075B6I3 123 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 DAD1P61803 113 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 FAM19A3Q7Z5A8 133 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 CXorf67Q86X51 503 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-211ENST00000539921 LEAP2Q969E1 77 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 DEFB127Q9H1M4 99 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 DNAH12Q6ZR08 3092 aa4.47□□□□□ -1.69
SNHG1-211ENST00000539921 IGLV3-9A0A075B6K5 115 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 A0A0J9YXV3 536 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 F6UB75 175 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 CCL21O00585 134 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 HOXD3P31249 432 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-211ENST00000539921 UBE2BP63146 152 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 PRO3102Q9H379 93 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 C14orf132Q9NPU4 83 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 LINC00474Q9P2X8 69 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 Q9UF83 564 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 SMAD5-AS1Q9Y6J3 95 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 NAV3Q8IVL0 2385 aa4.46□□□□□ -1.7
SNHG1-211ENST00000539921 TRAV23DV6A0A075B6W5 121 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 LOC110117498A0A087WWA1 95 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 CRPP02741 224 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 CTSGP08311 255 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 MGPP08493 103 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 RFPL3SP0C7P2 107 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 S100A4P26447 101 aaKnown RBP4.45□□□□□ -1.7
SNHG1-211ENST00000539921 MAGEA5P43359 124 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 RPL39P62891 51 aaKnown RBP4.45□□□□□ -1.7
SNHG1-211ENST00000539921 DEFB103AP81534 67 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 C15orf32Q32M92 178 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 IGFL4Q6B9Z1 124 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 SUMO4Q6EEV6 95 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 Q6ZVQ6 151 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 PHF5AQ7RTV0 110 aaKnown RBP4.45□□□□□ -1.7
SNHG1-211ENST00000539921 ORMDL1Q9P0S3 153 aa4.45□□□□□ -1.7
SNHG1-211ENST00000539921 PRRC2AP48634 2157 aaKnown RBP4.45□□□□□ -1.7
SNHG1-211ENST00000539921 BRWD1Q9NSI6 2320 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 TRAV12-3A0A0B4J271 114 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 ADORA2A-AS1P86434 159 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 SS18Q15532 418 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 PIK3CD-AS1Q5SR53 167 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 ZFAND2AQ8N6M9 145 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 TMEM254Q8TBM7 123 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 ZNF625Q96I27 306 aaPredicted RBP4.44□□□□□ -1.7
SNHG1-211ENST00000539921 FAM218AQ96MZ4 157 aa4.44□□□□□ -1.7
SNHG1-211ENST00000539921 DOCK7Q96N67 2140 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 BUB1B-PAK6H3BSN5 160 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 TMEM256-PLSCR3K7ERE1 68 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 TFF1P04155 84 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 IGF1P05019 195 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 RNASE3P12724 160 aaKnown RBP4.43□□□□□ -1.7
SNHG1-211ENST00000539921 SPINK2P20155 84 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 C19orf54Q5BKX5 351 aa4.43□□□□□ -1.7
SNHG1-211ENST00000539921 DGAT2L7PQ6IED9 249 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms