RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 TRBV6-5A0A0K0K1A5 114 aa13.91□□□□□ -0.18
SFSWAP-207ENST00000538548 F5H697 171 aa13.9□□□□□ -0.18
SFSWAP-207ENST00000538548 LGALS9O00182 355 aa13.9□□□□□ -0.18
SFSWAP-207ENST00000538548 JPT2Q9H910 190 aa13.9□□□□□ -0.18
SFSWAP-207ENST00000538548 EPG5Q9HCE0 2579 aa13.9□□□□□ -0.18
SFSWAP-207ENST00000538548 M0R2P5 195 aa13.9□□□□□ -0.18
SFSWAP-207ENST00000538548 TRIAP1O43715 76 aa13.89□□□□□ -0.19
SFSWAP-207ENST00000538548 CFAP161Q6P656 301 aa13.89□□□□□ -0.19
SFSWAP-207ENST00000538548 FAM159AQ6UWV7 190 aa13.89□□□□□ -0.19
SFSWAP-207ENST00000538548 A0A087WWL8 130 aa13.89□□□□□ -0.19
SFSWAP-207ENST00000538548 ZNF22P17026 224 aaPredicted RBP13.89□□□□□ -0.19
SFSWAP-207ENST00000538548 MED13LQ71F56 2210 aa13.89□□□□□ -0.19
SFSWAP-207ENST00000538548 CENPEQ02224 2701 aa13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 F6UB75 175 aa13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 GRNP28799 593 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 MRPL23Q16540 153 aaKnown RBP13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 SIRPDQ9H106 197 aa13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 BEX4Q9NWD9 120 aaPredicted RBP13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 MYO18BQ8IUG5 2567 aa13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 NSUN5P1Q3KNT7 163 aa13.88□□□□□ -0.19
SFSWAP-207ENST00000538548 ZFP36P26651 326 aaKnown RBP13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 CDSNQ15517 529 aa13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 RHOHQ15669 191 aa13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 UNQ9165/PRO28630Q6UXU0 137 aa13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 OPRPNQ99935 248 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 FAM223BA6NKX1 122 aa13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 C2orf82Q6UX34 121 aa13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 FAM223AQ8IWN6 122 aa13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 SMIM20Q8N5G0 67 aa13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 ZNF256Q9Y2P7 627 aaPredicted RBP13.87□□□□□ -0.19
SFSWAP-207ENST00000538548 IGHV3-64A0A075B6Q5 118 aa13.86□□□□□ -0.19
SFSWAP-207ENST00000538548 A0A0J9YXY3 114 aa13.86□□□□□ -0.19
SFSWAP-207ENST00000538548 UBE2E1P51965 193 aa13.86□□□□□ -0.19
SFSWAP-207ENST00000538548 MDFICQ9P1T7 246 aa13.86□□□□□ -0.19
SFSWAP-207ENST00000538548 KLLNB2CW77 178 aa13.85□□□□□ -0.19
SFSWAP-207ENST00000538548 H3BT86 120 aa13.85□□□□□ -0.19
SFSWAP-207ENST00000538548 HERV-K104P63124 156 aa13.85□□□□□ -0.19
SFSWAP-207ENST00000538548 NDUFA4O00483 81 aa13.85□□□□□ -0.19
SFSWAP-207ENST00000538548 FAM240AA0A1B0GVK7 77 aa13.84□□□□□ -0.19
SFSWAP-207ENST00000538548 H7C423 109 aa13.84□□□□□ -0.19
SFSWAP-207ENST00000538548 RPL11P62913 178 aaKnown RBP13.84□□□□□ -0.19
SFSWAP-207ENST00000538548 SHISA2Q6UWI4 295 aa13.84□□□□□ -0.19
SFSWAP-207ENST00000538548 SAA4P35542 130 aa13.83□□□□□ -0.19
SFSWAP-207ENST00000538548 C5orf56Q8N8D9 126 aa13.83□□□□□ -0.19
SFSWAP-207ENST00000538548 ICOSQ9Y6W8 199 aa13.83□□□□□ -0.19
SFSWAP-207ENST00000538548 TRAV41A0A0B4J266 112 aa13.83□□□□□ -0.2
SFSWAP-207ENST00000538548 USP24Q9UPU5 2620 aa13.83□□□□□ -0.2
SFSWAP-207ENST00000538548 A0A0J9YXV3 536 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 FAM74A4Q5TZK3 123 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 C20orf203Q8NBC4 194 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 LITAFQ99732 161 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 CSMD2Q7Z408 3487 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 M0QY20 66 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 COX6CP09669 75 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 SPG11Q96JI7 2443 aa13.82□□□□□ -0.2
SFSWAP-207ENST00000538548 C19orf54Q5BKX5 351 aa13.81□□□□□ -0.2
SFSWAP-207ENST00000538548 ZNF580Q9UK33 172 aa13.81□□□□□ -0.2
SFSWAP-207ENST00000538548 TRBV12-3P01733 135 aa13.81□□□□□ -0.2
SFSWAP-207ENST00000538548 IGHV3-30-3P0DP02 117 aa13.81□□□□□ -0.2
SFSWAP-207ENST00000538548 MEIG1Q5JSS6 88 aa13.81□□□□□ -0.2
SFSWAP-207ENST00000538548 CCL21O00585 134 aa13.8□□□□□ -0.2
SFSWAP-207ENST00000538548 ZNF56Q15929 161 aa13.8□□□□□ -0.2
SFSWAP-207ENST00000538548 DEFB121Q5J5C9 76 aa13.8□□□□□ -0.2
SFSWAP-207ENST00000538548 C11orf71Q6IPW1 123 aa13.8□□□□□ -0.2
SFSWAP-207ENST00000538548 IGLV4-3A0A075B6K6 122 aa13.79□□□□□ -0.2
SFSWAP-207ENST00000538548 PRSS2P07478 247 aa13.79□□□□□ -0.2
SFSWAP-207ENST00000538548 TIMM21Q9BVV7 248 aa13.79□□□□□ -0.2
SFSWAP-207ENST00000538548 LINC00527Q9UJ94 153 aa13.79□□□□□ -0.2
SFSWAP-207ENST00000538548 USP9XQ93008 2570 aaPredicted RBP13.79□□□□□ -0.2
SFSWAP-207ENST00000538548 IGKV3-7A0A075B6H7 116 aa13.78□□□□□ -0.2
SFSWAP-207ENST00000538548 FBXL19-AS1Q494R0 122 aa13.78□□□□□ -0.2
SFSWAP-207ENST00000538548 SPANXDQ9BXN6 97 aa13.78□□□□□ -0.2
SFSWAP-207ENST00000538548 SPANXCQ9NY87 97 aa13.78□□□□□ -0.2
SFSWAP-207ENST00000538548 CELSR1Q9NYQ6 3014 aa13.78□□□□□ -0.2
SFSWAP-207ENST00000538548 TRBV7-7A0A0K0K1E9 115 aa13.78□□□□□ -0.2
SFSWAP-207ENST00000538548 C9orf85Q96MD7 179 aa13.78□□□□□ -0.2
SFSWAP-207ENST00000538548 ADARB2-AS1A8MUL3 147 aa13.77□□□□□ -0.2
SFSWAP-207ENST00000538548 I3L3M4 83 aa13.77□□□□□ -0.21
SFSWAP-207ENST00000538548 LST1O00453 97 aa13.77□□□□□ -0.21
SFSWAP-207ENST00000538548 SPXQ9BT56 116 aa13.77□□□□□ -0.21
SFSWAP-207ENST00000538548 TRAV12-3A0A0B4J271 114 aa13.77□□□□□ -0.21
SFSWAP-207ENST00000538548 UCNP55089 124 aa13.77□□□□□ -0.21
SFSWAP-207ENST00000538548 KLRB1Q12918 225 aa13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 RHPN1-AS1Q9BWJ2 59 aa13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 IGHV3-16A0A0C4DH30 117 aa13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 ADAMTSL4-AS1Q5T5F5 129 aa13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 TMEM219Q86XT9 240 aa13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 DUX3Q96PT4 197 aa13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 MOB4Q9Y3A3 225 aa13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 PRRC2AP48634 2157 aaKnown RBP13.76□□□□□ -0.21
SFSWAP-207ENST00000538548 CELSR2Q9HCU4 2923 aa13.75□□□□□ -0.21
SFSWAP-207ENST00000538548 MIAQ16674 131 aa13.75□□□□□ -0.21
SFSWAP-207ENST00000538548 MRPS36P82909 103 aaKnown RBP13.75□□□□□ -0.21
SFSWAP-207ENST00000538548 CLEC2BQ92478 149 aa13.75□□□□□ -0.21
SFSWAP-207ENST00000538548 NPFFO15130 113 aa13.74□□□□□ -0.21
SFSWAP-207ENST00000538548 CHCHD5Q9BSY4 110 aa13.74□□□□□ -0.21
SFSWAP-207ENST00000538548 TRGV11A0A075B6L2 103 aa13.74□□□□□ -0.21
SFSWAP-207ENST00000538548 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
SFSWAP-207ENST00000538548 TMEM126AQ9H061 195 aa13.74□□□□□ -0.21
SFSWAP-207ENST00000538548 NDUFA12Q9UI09 145 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms