RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 J3KT08 172 aa13.3□□□□□ -0.28
TRA2A-211ENST00000538367 SOCS3O14543 225 aa13.3□□□□□ -0.28
TRA2A-211ENST00000538367 MIAQ16674 131 aa13.3□□□□□ -0.28
TRA2A-211ENST00000538367 CLEC19AQ6UXS0 136 aa13.3□□□□□ -0.28
TRA2A-211ENST00000538367 SDIM1Q6ZPB5 146 aa13.3□□□□□ -0.28
TRA2A-211ENST00000538367 TIMM17BO60830 172 aa13.29□□□□□ -0.28
TRA2A-211ENST00000538367 IGF1P05019 195 aa13.29□□□□□ -0.28
TRA2A-211ENST00000538367 VMO1Q7Z5L0 202 aa13.29□□□□□ -0.28
TRA2A-211ENST00000538367 ZNF256Q9Y2P7 627 aaPredicted RBP13.29□□□□□ -0.28
TRA2A-211ENST00000538367 SPTA1P02549 2419 aa13.28□□□□□ -0.28
TRA2A-211ENST00000538367 RPS28P62857 69 aaKnown RBP13.28□□□□□ -0.28
TRA2A-211ENST00000538367 DUX3Q96PT4 197 aa13.28□□□□□ -0.28
TRA2A-211ENST00000538367 ATRXP46100 2492 aa13.27□□□□□ -0.28
TRA2A-211ENST00000538367 PKD1L2Q7Z442 2459 aa13.27□□□□□ -0.28
TRA2A-211ENST00000538367 TMEM61Q8N0U2 210 aa13.27□□□□□ -0.28
TRA2A-211ENST00000538367 GNRH2O43555 120 aa13.27□□□□□ -0.29
TRA2A-211ENST00000538367 IGHV3-30-3P0DP02 117 aa13.27□□□□□ -0.29
TRA2A-211ENST00000538367 C20orf203Q8NBC4 194 aa13.27□□□□□ -0.29
TRA2A-211ENST00000538367 TIMM21Q9BVV7 248 aa13.27□□□□□ -0.29
TRA2A-211ENST00000538367 IGHV3OR16-13A0A075B7E8 117 aa13.26□□□□□ -0.29
TRA2A-211ENST00000538367 IGHV3-74A0A0B4J1X5 117 aa13.26□□□□□ -0.29
TRA2A-211ENST00000538367 NPFFO15130 113 aa13.26□□□□□ -0.29
TRA2A-211ENST00000538367 LINC00694P0DN24 101 aa13.26□□□□□ -0.29
TRA2A-211ENST00000538367 ID1P41134 155 aa13.26□□□□□ -0.29
TRA2A-211ENST00000538367 ITPR1Q14643 2758 aa13.25□□□□□ -0.29
TRA2A-211ENST00000538367 ECSCRQ19T08 205 aa13.25□□□□□ -0.29
TRA2A-211ENST00000538367 PYGO1Q9Y3Y4 419 aa13.25□□□□□ -0.29
TRA2A-211ENST00000538367 SPRY2O43597 315 aa13.25□□□□□ -0.29
TRA2A-211ENST00000538367 MRPS36P82909 103 aaKnown RBP13.25□□□□□ -0.29
TRA2A-211ENST00000538367 TPRP12270 2363 aaKnown RBP13.25□□□□□ -0.29
TRA2A-211ENST00000538367 IGLV4-3A0A075B6K6 122 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 IGHV1-58A0A0C4DH39 117 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 KLLNB2CW77 178 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 I3L3M4 83 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 CCL21O00585 134 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 ATP6V0E1O15342 81 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 DCANP1Q8TF63 244 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 ACACBO00763 2458 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 J3KRW8 73 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 POLEQ07864 2286 aa13.24□□□□□ -0.29
TRA2A-211ENST00000538367 PCNX1Q96RV3 2341 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 IGHV3-49A0A0A0MS15 119 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 FAM223BA6NKX1 122 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 LYNX1G3V0Z9 82 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 LYNX1P0DP58 116 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 HERVK_113P63121 156 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 C5orf38Q86SI9 138 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 FAM223AQ8IWN6 122 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 CLEC2BQ92478 149 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 SPXQ9BT56 116 aa13.23□□□□□ -0.29
TRA2A-211ENST00000538367 A0A0J9YXV3 536 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 F5H697 171 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 WIPF1O43516 503 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 CRYGAP11844 174 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 COX7CP15954 63 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 TMEM219Q86XT9 240 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 PEMTQ9UBM1 199 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 M0QY20 66 aa13.22□□□□□ -0.29
TRA2A-211ENST00000538367 NDUFA12Q9UI09 145 aa13.21□□□□□ -0.29
TRA2A-211ENST00000538367 MUC4Q99102 2169 aa13.21□□□□□ -0.3
TRA2A-211ENST00000538367 SMIM9A6NGZ8 99 aa13.21□□□□□ -0.3
TRA2A-211ENST00000538367 PRSS2P07478 247 aa13.21□□□□□ -0.3
TRA2A-211ENST00000538367 DAND5Q8N907 189 aa13.21□□□□□ -0.3
TRA2A-211ENST00000538367 COL6A6A6NMZ7 2263 aa13.21□□□□□ -0.3
TRA2A-211ENST00000538367 ARHGAP32A7KAX9 2087 aa13.2□□□□□ -0.3
TRA2A-211ENST00000538367 C9orf85Q96MD7 179 aa13.2□□□□□ -0.3
TRA2A-211ENST00000538367 IGHV3-64A0A075B6Q5 118 aa13.19□□□□□ -0.3
TRA2A-211ENST00000538367 NDUFA4O00483 81 aa13.19□□□□□ -0.3
TRA2A-211ENST00000538367 HIST1H4AP62805 103 aaKnown RBP13.19□□□□□ -0.3
TRA2A-211ENST00000538367 OR13C6PQ8NH95 151 aa13.19□□□□□ -0.3
TRA2A-211ENST00000538367 EDA2RQ9HAV5 297 aa13.19□□□□□ -0.3
TRA2A-211ENST00000538367 LINC00527Q9UJ94 153 aa13.19□□□□□ -0.3
TRA2A-211ENST00000538367 ATOX1O00244 68 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 ADORA2A-AS1P86434 159 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 ADAMTSL4-AS1Q5T5F5 129 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 FAM222AQ5U5X8 452 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 VSIG2Q96IQ7 327 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 A0A087WWL8 130 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 COX7A2LO14548 114 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 COPS9Q8WXC6 57 aa13.18□□□□□ -0.3
TRA2A-211ENST00000538367 OPRPNQ99935 248 aaPredicted RBP13.18□□□□□ -0.3
TRA2A-211ENST00000538367 TRAV8-3A0A0A6YYJ7 113 aa13.17□□□□□ -0.3
TRA2A-211ENST00000538367 TINCRA0A1B0GVN0 87 aa13.17□□□□□ -0.3
TRA2A-211ENST00000538367 TRACP01848 142 aa13.17□□□□□ -0.3
TRA2A-211ENST00000538367 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
TRA2A-211ENST00000538367 FBXL19-AS1Q494R0 122 aa13.16□□□□□ -0.3
TRA2A-211ENST00000538367 C3orf56Q8N813 242 aa13.16□□□□□ -0.3
TRA2A-211ENST00000538367 SMCR5Q8TEV8 140 aa13.16□□□□□ -0.3
TRA2A-211ENST00000538367 JPT2Q9H910 190 aa13.16□□□□□ -0.3
TRA2A-211ENST00000538367 INAFM2P0DMQ5 153 aa13.16□□□□□ -0.3
TRA2A-211ENST00000538367 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.15□□□□□ -0.3
TRA2A-211ENST00000538367 ZNF580Q9UK33 172 aa13.15□□□□□ -0.3
TRA2A-211ENST00000538367 USP24Q9UPU5 2620 aa13.15□□□□□ -0.3
TRA2A-211ENST00000538367 CD28P10747 220 aa13.15□□□□□ -0.3
TRA2A-211ENST00000538367 FAM19A5Q7Z5A7 132 aaPredicted RBP13.15□□□□□ -0.3
TRA2A-211ENST00000538367 C19orf54Q5BKX5 351 aa13.14□□□□□ -0.31
TRA2A-211ENST00000538367 GAGE2AQ6NT46 116 aa13.14□□□□□ -0.31
TRA2A-211ENST00000538367 C2orf48Q96LS8 159 aa13.14□□□□□ -0.31
TRA2A-211ENST00000538367 IGHV3-16A0A0C4DH30 117 aa13.13□□□□□ -0.31
TRA2A-211ENST00000538367 G3V318 75 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms