RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 MBP02144 154 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 ANGP03950 147 aaKnown RBP3.42□□□□□ -1.86
SNHG1-207ENST00000537965 ARL14EPLP0DKL9 152 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 RPL12P30050 165 aaKnown RBP3.42□□□□□ -1.86
SNHG1-207ENST00000537965 CDC34P49427 236 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-207ENST00000537965 ZNF80P51504 273 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-207ENST00000537965 GNG5P63218 68 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 DNLZQ5SXM8 178 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 FAM74A4Q5TZK3 123 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 UFSP1Q6NVU6 142 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 PRNTQ86SH4 94 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 C14orf178Q8N769 122 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-207ENST00000537965 OR11H4Q8NGC9 324 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 PPP1R1CQ8WVI7 109 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 SGK494Q96LW2 274 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 NKX6-2Q9C056 277 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-207ENST00000537965 EPDR1Q9UM22 224 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 PHLDA3Q9Y5J5 127 aa3.42□□□□□ -1.86
SNHG1-207ENST00000537965 TRBV6-8A0A0A6YYG3 113 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-207ENST00000537965 SIX6O95475 246 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 MPC2O95563 127 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 CXorf1O96002 111 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 HLA-DQA1P01909 254 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 ARMS2P0C7Q2 107 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 STAG3L3P0CL85 134 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 TPT1P13693 172 aaKnown RBP3.41□□□□□ -1.86
SNHG1-207ENST00000537965 GCHFRP30047 84 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 UBE2D3P61077 147 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 UBE2D2P62837 147 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 SERF2P84101 59 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 ENHOQ6UWT2 76 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 ZFP82Q8N141 532 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 C15orf54Q8N8G6 183 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 ENKURQ8TC29 256 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 SUN5Q8TC36 379 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 SFRP2Q96HF1 295 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 ZFP30Q9Y2G7 519 aa3.41□□□□□ -1.86
SNHG1-207ENST00000537965 IGHV3-64A0A075B6Q5 118 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 TRAV8-4A0A0B4J246 113 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 TRAV34A0A0B4J273 112 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 IGKV3D-20A0A0C4DH25 116 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 A0A1W2PRE2 83 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 H3BVH4 76 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 HMGB3O15347 200 aaKnown RBP3.4□□□□□ -1.87
SNHG1-207ENST00000537965 IFNA7P01567 189 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 P01737 135 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 PRSS1P07477 247 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 MT1HL1P0DM35 61 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 GZMBP10144 247 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 RAB4BP61018 213 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 RAB2AP61019 212 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 FAM162BQ5T6X4 162 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 SDIM1Q6ZPB5 146 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 LINC00299Q6ZSB3 139 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 OR10G8Q8NGN5 311 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 C7orf33Q8WU49 177 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 S100ZQ8WXG8 99 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 HIST1H2BAQ96A08 127 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 DNAJC30Q96LL9 226 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 CHCHD5Q9BSY4 110 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 PSMG3Q9BT73 122 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-207ENST00000537965 SMIM3Q9BZL3 60 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 ACTR3CQ9C0K3 210 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-207ENST00000537965 JPT2Q9H910 190 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 NDUFA13Q9P0J0 144 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 Q9UF83 564 aa3.4□□□□□ -1.87
SNHG1-207ENST00000537965 LRP1Q07954 4544 aaKnown RBP3.4□□□□□ -1.87
SNHG1-207ENST00000537965 KRBOX1C9JBD0 128 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 M0R381 172 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 SSNA1O43805 119 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 PTTG1O95997 202 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 HNRNPA3P51991 378 aaKnown RBP3.39□□□□□ -1.87
SNHG1-207ENST00000537965 SEC61BP60468 96 aaKnown RBP3.39□□□□□ -1.87
SNHG1-207ENST00000537965 CNBPP62633 177 aaKnown RBP3.39□□□□□ -1.87
SNHG1-207ENST00000537965 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 CIRBPQ14011 172 aaKnown RBP3.39□□□□□ -1.87
SNHG1-207ENST00000537965 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 GAGE2AQ6NT46 116 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 PRR34Q9NV39 138 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 TNFSF18Q9UNG2 199 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 ARL2-SNX15V9GYD0 113 aa3.39□□□□□ -1.87
SNHG1-207ENST00000537965 TRBV25-1A0A075B6N4 114 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 hDV102S1A0JD36 115 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 INMT-MINDY4F8WBC2 141 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 M0R036 132 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 PEX7O00628 323 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 EIF3GO75821 320 aaKnown RBP eCLIP3.38□□□□□ -1.87
SNHG1-207ENST00000537965 ATP6V0CP27449 155 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 H2BFSP57053 126 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 UBE2G1P62253 170 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 SNRPEP62304 92 aaKnown RBP3.38□□□□□ -1.87
SNHG1-207ENST00000537965 ZNF56Q15929 161 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 MPV17L2Q567V2 206 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
SNHG1-207ENST00000537965 REG3GQ6UW15 175 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms