RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 JPT2Q9H910 190 aa6.91□□□□□ -1.3
CSDE1-217ENST00000534699 FAM229AH3BQW9 127 aa6.9□□□□□ -1.3
CSDE1-217ENST00000534699 ZNF56Q15929 161 aa6.9□□□□□ -1.3
CSDE1-217ENST00000534699 CENPWQ5EE01 88 aa6.9□□□□□ -1.3
CSDE1-217ENST00000534699 TNFRSF18Q9Y5U5 241 aa6.9□□□□□ -1.3
CSDE1-217ENST00000534699 IGLV2-8P01709 118 aa6.9□□□□□ -1.31
CSDE1-217ENST00000534699 P01737 135 aa6.9□□□□□ -1.31
CSDE1-217ENST00000534699 KRTAP10-1P60331 282 aa6.9□□□□□ -1.31
CSDE1-217ENST00000534699 IQCJQ1A5X6 159 aa6.9□□□□□ -1.31
CSDE1-217ENST00000534699 Q6ZSA8 131 aa6.9□□□□□ -1.31
CSDE1-217ENST00000534699 A0A087WWL8 130 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 CTRLP40313 264 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 OR10AG1Q8NH19 301 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 TMSB15BA0A087X1C1 80 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 NCR2O95944 276 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 TEX261Q6UWH6 196 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 FAM231DQ6ZW35 169 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 LYPD6BQ8NI32 183 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 DPH3P1Q9H4G8 78 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 MED9Q9NWA0 146 aa6.89□□□□□ -1.31
CSDE1-217ENST00000534699 TRBV25-1A0A075B6N4 114 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 TRAV8-4A0A0B4J246 113 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 IGHV1-24A0A0C4DH33 117 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 A0A1B0GUV1 79 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 H7C423 109 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 CT83Q5H943 113 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 C9orf62Q8N4C0 152 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 OR2D3Q8NGH3 330 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 CRPP02741 224 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 DGAT2L7PQ6IED9 249 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 C1orf43Q9BWL3 253 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 Q9HAA7 133 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 PRR34Q9NV39 138 aa6.88□□□□□ -1.31
CSDE1-217ENST00000534699 RASL11AQ6T310 242 aa6.87□□□□□ -1.31
CSDE1-217ENST00000534699 CLRN3Q8NCR9 226 aa6.87□□□□□ -1.31
CSDE1-217ENST00000534699 FAM231BA6NCW3 169 aa6.87□□□□□ -1.31
CSDE1-217ENST00000534699 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
CSDE1-217ENST00000534699 SMIM15Q7Z3B0 74 aa6.87□□□□□ -1.31
CSDE1-217ENST00000534699 RYR1P21817 5038 aa6.86□□□□□ -1.31
CSDE1-217ENST00000534699 F5H697 171 aa6.86□□□□□ -1.31
CSDE1-217ENST00000534699 M0QY20 66 aa6.86□□□□□ -1.31
CSDE1-217ENST00000534699 INAFM2P0DMQ5 153 aa6.86□□□□□ -1.31
CSDE1-217ENST00000534699 RPL19P84098 196 aaKnown RBP6.86□□□□□ -1.31
CSDE1-217ENST00000534699 NIT2Q9NQR4 276 aa6.86□□□□□ -1.31
CSDE1-217ENST00000534699 RPP21Q9H633 154 aaKnown RBP6.86□□□□□ -1.31
CSDE1-217ENST00000534699 KLK12Q9UKR0 248 aa6.86□□□□□ -1.31
CSDE1-217ENST00000534699 FOXA3P55318 350 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-217ENST00000534699 PKIGQ9Y2B9 76 aa6.85□□□□□ -1.31
CSDE1-217ENST00000534699 KIAA1109Q2LD37 5005 aa6.85□□□□□ -1.31
CSDE1-217ENST00000534699 GFRA4Q9GZZ7 299 aa6.85□□□□□ -1.31
CSDE1-217ENST00000534699 IGKV2D-24A0A075B6R9 120 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 LINC00862A6NCI5 91 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 A8MWL6 223 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 Q5VSD8 79 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 UBE2WQ96B02 151 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 KRTAP4-5Q9BYR2 181 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 TMEM262E9PQX1 116 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 NUDT10Q8NFP7 164 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 NUDT11Q96G61 164 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 CHCHD5Q9BSY4 110 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 TMEM243Q9BU79 118 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 DERL1Q9BUN8 251 aa6.84□□□□□ -1.31
CSDE1-217ENST00000534699 A0A1B0GV50 99 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 FAM74A3Q4VXF1 159 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 SUMO4Q6EEV6 95 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 SMDT1Q9H4I9 107 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 RAB19A4D1S5 217 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 SMAGPQ0VAQ4 97 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 ENHOQ6UWT2 76 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 BORCS7Q96B45 105 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 LOC105371267A0A1B0GV96 52 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 Q9UF83 564 aa6.83□□□□□ -1.32
CSDE1-217ENST00000534699 TMA7Q9Y2S6 64 aaKnown RBP6.83□□□□□ -1.32
CSDE1-217ENST00000534699 TRBV6-5A0A0K0K1A5 114 aa6.82□□□□□ -1.32
CSDE1-217ENST00000534699 PPP1R17O96001 155 aa6.82□□□□□ -1.32
CSDE1-217ENST00000534699 ANGP03950 147 aaKnown RBP6.82□□□□□ -1.32
CSDE1-217ENST00000534699 NTM-AS1Q6ZSK4 140 aa6.82□□□□□ -1.32
CSDE1-217ENST00000534699 RNF185Q96GF1 192 aa6.82□□□□□ -1.32
CSDE1-217ENST00000534699 GATCO43716 136 aaKnown RBP6.82□□□□□ -1.32
CSDE1-217ENST00000534699 RBX1P62877 108 aa6.82□□□□□ -1.32
CSDE1-217ENST00000534699 COTL1Q14019 142 aa6.82□□□□□ -1.32
CSDE1-217ENST00000534699 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
CSDE1-217ENST00000534699 PKHD1P08F94 4074 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 TRBV20OR9-2A0A075B6H5 130 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 MGPP08493 103 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 ZNF25P17030 456 aaPredicted RBP6.81□□□□□ -1.32
CSDE1-217ENST00000534699 NTF3P20783 257 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 CFAP161Q6P656 301 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 OCC1Q8TAD7 63 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 OSTCQ9NRP0 149 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 MPV17L2Q567V2 206 aa6.81□□□□□ -1.32
CSDE1-217ENST00000534699 C15orf54Q8N8G6 183 aa6.8□□□□□ -1.32
CSDE1-217ENST00000534699 CCL25O15444 150 aa6.8□□□□□ -1.32
CSDE1-217ENST00000534699 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
CSDE1-217ENST00000534699 CLLU1Q5K131 121 aa6.8□□□□□ -1.32
CSDE1-217ENST00000534699 KRTAP26-1Q6PEX3 210 aa6.8□□□□□ -1.32
CSDE1-217ENST00000534699 UBE2L6O14933 153 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 TCAPO15273 167 aa6.79□□□□□ -1.32
CSDE1-217ENST00000534699 TWIST1Q15672 202 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms