RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 DEFB104AQ8WTQ1 72 aa2.31□□□□□ -2.04
CSDE1-216ENST00000534389 TMEM190Q8WZ59 177 aa2.31□□□□□ -2.04
CSDE1-216ENST00000534389 C9orf85Q96MD7 179 aa2.31□□□□□ -2.04
CSDE1-216ENST00000534389 OPRPNQ99935 248 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-216ENST00000534389 TIMM21Q9BVV7 248 aa2.31□□□□□ -2.04
CSDE1-216ENST00000534389 KRTAP1-5Q9BYS1 174 aa2.31□□□□□ -2.04
CSDE1-216ENST00000534389 SPANXCQ9NY87 97 aa2.31□□□□□ -2.04
CSDE1-216ENST00000534389 ZNF256Q9Y2P7 627 aaPredicted RBP2.31□□□□□ -2.04
CSDE1-216ENST00000534389 DOCK10Q96BY6 2186 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 F5P12259 2224 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 CEP350Q5VT06 3117 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 TRAV8-3A0A0A6YYJ7 113 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 TRGV5A0A0B4J1U4 118 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 IGHV3-72A0A0B4J1Y9 119 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 IGHV1OR15-9A0A0B4J2B8 117 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 IGKV3D-7A0A0C4DH55 119 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 A0A0J9YX75 114 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 SCRG1O75711 98 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 ACYP1P07311 99 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 IGHV1-2P23083 117 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 NBL1P41271 181 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 LINC00315P59091 139 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 RPL39P62891 51 aaKnown RBP2.3□□□□□ -2.04
CSDE1-216ENST00000534389 Q1RN00 199 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 C9orf129Q5T035 196 aaKnown RBP2.3□□□□□ -2.04
CSDE1-216ENST00000534389 ATP1A1-AS1Q5TC04 95 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 LYPD5Q6UWN5 251 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 Q8N2B8 174 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 SLC25A45Q8N413 288 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 DAND5Q8N907 189 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 NUP37Q8NFH4 326 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 RNASE6Q93091 150 aaKnown RBP2.3□□□□□ -2.04
CSDE1-216ENST00000534389 GAFA1Q96PS6 74 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 SPANXDQ9BXN6 97 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 HES7Q9BYE0 225 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 LINC00474Q9P2X8 69 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 S4R3C0 116 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 PLXNB1O43157 2135 aa2.3□□□□□ -2.04
CSDE1-216ENST00000534389 EP400Q96L91 3159 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 PRR14LQ5THK1 2151 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 PI4KAP42356 2102 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 DSCAMO60469 2012 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 IGHV3-64A0A075B6Q5 118 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 TRAV12-2A0A075B6T6 113 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 A0A087WVE0 104 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-216ENST00000534389 IGHV5-10-1A0A0J9YXX1 117 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 A0A0U1RQV1 116 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 NDUFC2-KCTD14E9PQ53 114 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 CCL24O00175 119 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 TIMM8AO60220 97 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-216ENST00000534389 IGF1P05019 195 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 BAALC-AS2P0C853 105 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 CD59P13987 128 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 CCL3L1P16619 93 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 LGALS3P17931 250 aaKnown RBP2.29□□□□□ -2.04
CSDE1-216ENST00000534389 RPL27AP46776 148 aaKnown RBP2.29□□□□□ -2.04
CSDE1-216ENST00000534389 SYNJ2BPP57105 145 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 HILS1P60008 231 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 KLRB1Q12918 225 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 PDE6HQ13956 83 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 ORMDL2Q53FV1 153 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 PRR9Q5T870 116 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 C1orf195Q5TG92 126 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 Q6JHZ5 121 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 Q6ZS52 159 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 TMEM61Q8N0U2 210 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 WFDC11Q8NEX6 87 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 FAM104AQ969W3 186 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 FAM218AQ96MZ4 157 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 CCL13Q99616 98 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 UBE2D4Q9Y2X8 147 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 MOB4Q9Y3A3 225 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 SERP1Q9Y6X1 66 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 U3KQA8 63 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 V9GYY9 64 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 ABCA1O95477 2261 aa2.29□□□□□ -2.04
CSDE1-216ENST00000534389 RAI1Q7Z5J4 1906 aaPredicted RBP2.29□□□□□ -2.04
CSDE1-216ENST00000534389 ZNF318Q5VUA4 2279 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 A0A0J9YXV3 536 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 CLPSL1A2RUU4 121 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 SDHAF1A6NFY7 115 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 H7BZZ5 65 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 M0R1W7 72 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 ENSAO43768 121 aaKnown RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 LOXP28300 417 aaPredicted RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 RPL28P46779 137 aaKnown RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 POLR2KP53803 58 aaKnown RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 PRB3Q04118 309 aaPredicted RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 DAZ2Q13117 558 aaKnown RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 SPINK14Q6IE38 97 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 IGFL2Q6UWQ7 119 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 FAM19A1Q7Z5A9 133 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 DAZ4Q86SG3 579 aaKnown RBP2.28□□□□□ -2.04
CSDE1-216ENST00000534389 RNF182Q8N6D2 247 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 DEFB108BQ8NET1 73 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 TMEM141Q96I45 108 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 DEFB118Q96PH6 123 aa2.28□□□□□ -2.04
CSDE1-216ENST00000534389 SLC50A1Q9BRV3 221 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms