RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 CCL21O00585 134 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 TIMM17BO60830 172 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 SNRPD3P62318 126 aaKnown RBP3.08□□□□□ -1.92
ITGB1-219ENST00000534049 PVRIGQ6DKI7 326 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 GUSBP11Q6P575 273 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 Q6ZR03 302 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 FP248Q71RG6 208 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-219ENST00000534049 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-219ENST00000534049 NABP2Q9BQ15 211 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 SLC50A1Q9BRV3 221 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 RBM12B-AS1Q9P1G2 102 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 CTSZQ9UBR2 303 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 LRP4O75096 1905 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 MYO18BQ8IUG5 2567 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 ASXL3Q9C0F0 2248 aa3.08□□□□□ -1.92
ITGB1-219ENST00000534049 GOLGA4Q13439 2230 aaKnown RBP3.07□□□□□ -1.92
ITGB1-219ENST00000534049 COL6A6A6NMZ7 2263 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 URB1O60287 2271 aaKnown RBP3.07□□□□□ -1.92
ITGB1-219ENST00000534049 TRBV6-6A0A0A6YYG2 114 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 TRAV41A0A0B4J266 112 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 TRBV10-3A0A0K0K1G6 114 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 IBA57-AS1B1ANH7 110 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 K7EMI3 77 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 EFNA2O43921 213 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 IGHV3-33P01772 117 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 CCKP06307 115 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 RNASE2P10153 161 aaKnown RBP3.07□□□□□ -1.92
ITGB1-219ENST00000534049 EDDM3BP56851 147 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 FGF12P61328 243 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 TFF3Q07654 80 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 KLKP1Q107X0 134 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 ECSCRQ19T08 205 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 C15orf32Q32M92 178 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 ZNF542PQ5EBM4 170 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 ZNF818PQ6ZRF7 136 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 WDR86Q86TI4 376 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 Q8N7P7 452 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 Q9H8V8 135 aa3.07□□□□□ -1.92
ITGB1-219ENST00000534049 PHPT1Q9NRX4 125 aaPredicted RBP3.07□□□□□ -1.92
ITGB1-219ENST00000534049 PIEZO2Q9H5I5 2752 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 CSMD1Q96PZ7 3565 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 IGHV4-30-2A0A087WSY4 118 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 SPTY2D1-AS1A0A0U1RR47 76 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 F8VRH5 84 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 H3BSH0 61 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 K7EMT4 169 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 M0R135 149 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 NXPH4O95158 308 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 DNAH10OSP0CZ25 163 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 XCL1P47992 114 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 EIF4EBP1Q13541 118 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-219ENST00000534049 FAM222AQ5U5X8 452 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 LINC00596Q86U02 117 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 SLC25A29Q8N8R3 303 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 TMEM75Q8N9X5 138 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 DYNLRB2Q8TF09 96 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 SPTSSAQ969W0 71 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 CCL28Q9NRJ3 127 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 XCL2Q9UBD3 114 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 FLNCQ14315 2725 aa3.06□□□□□ -1.92
ITGB1-219ENST00000534049 USP9XQ93008 2570 aaPredicted RBP3.06□□□□□ -1.92
ITGB1-219ENST00000534049 SPTAN1Q13813 2472 aaKnown RBP3.05□□□□□ -1.92
ITGB1-219ENST00000534049 DOCK4Q8N1I0 1966 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 TRAV7A0A075B6U4 112 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 TRAV13-2A0A0B4J235 113 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 A0A0G2JRQ6 117 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 A0A1W2PQD3 144 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 IQCF6A8MYZ5 107 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 H7BZZ5 65 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 K7EQD1 137 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV1-5P01602 117 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV3-15P01624 115 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 IGLV3-1P01715 115 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 UBE2BP63146 152 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 RPS21P63220 83 aaKnown RBP3.05□□□□□ -1.92
ITGB1-219ENST00000534049 RBM3P98179 157 aaKnown RBP3.05□□□□□ -1.92
ITGB1-219ENST00000534049 PLGLAQ15195 96 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 DEFB133Q30KQ1 61 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 ZNF826PQ6ZT77 177 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 PHF5AQ7RTV0 110 aaKnown RBP3.05□□□□□ -1.92
ITGB1-219ENST00000534049 MKXQ8IYA7 352 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 CD177Q8N6Q3 437 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 C11orf45Q8TAV5 145 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 DCANP1Q8TF63 244 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 TSACCQ96A04 125 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-219ENST00000534049 PGLYRP4Q96LB8 373 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 ZNF714Q96N38 554 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 TIMM8BQ9Y5J9 83 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-219ENST00000534049 NAV2Q8IVL1 2488 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 KNTC1P50748 2209 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 NUP214P35658 2090 aaPredicted RBP3.05□□□□□ -1.92
ITGB1-219ENST00000534049 UNC79Q9P2D8 2635 aa3.05□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV1D-42A0A075B6H8 117 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 TRAV40A0A0B4J280 105 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 IGKV1-9A0A0C4DH69 117 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 KLLNB2CW77 178 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 LST1O00453 97 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 COX7A2P2O60397 106 aa3.04□□□□□ -1.92
ITGB1-219ENST00000534049 IGHV3-30P01768 117 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms