RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ASPHD1Q5U4P2 390 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 TET1Q8NFU7 2136 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 K7EQD1 137 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 TSHBP01222 138 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 C16orf74Q96GX8 76 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 MIA3Q5JRA6 1907 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 TEX49A0A1B0GTD5 131 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 F8WDY8 70 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 LYNX1G3V0Z9 82 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 LYNX1P0DP58 116 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 LMO4P61968 165 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 BEAN1Q3B7T3 259 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 LINC01356Q8N9X3 169 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 ACACAQ13085 2346 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 GNRH2O43555 120 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 RBM3P98179 157 aaKnown RBP3.02□□□□□ -1.93
SOX6-217ENST00000533870 LY6EQ16553 131 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 DSCR8Q96T75 97 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 BPESC1Q9GZL8 116 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 CDKN2A-AS1Q9UH64 79 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 VPREB3Q9UKI3 123 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 PIEZO1Q92508 2521 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 DEFB114Q30KQ6 69 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 KIAA1671Q9BY89 1806 aa3.02□□□□□ -1.93
SOX6-217ENST00000533870 C2CD3Q4AC94 2353 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 TRAV7A0A075B6U4 112 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 NDUFB1O75438 58 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 IGLV1-40P01703 118 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 SMCPP49901 116 aaPredicted RBP3.01□□□□□ -1.93
SOX6-217ENST00000533870 INSL3P51460 131 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 RPL39P62891 51 aaKnown RBP3.01□□□□□ -1.93
SOX6-217ENST00000533870 C20orf173Q96LM9 149 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 SMAD5-AS1Q9Y6J3 95 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 PI4KAP42356 2102 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 HAMPP81172 84 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 SPINK13Q1W4C9 94 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 ZNF106Q9H2Y7 1883 aaKnown RBP3.01□□□□□ -1.93
SOX6-217ENST00000533870 IGHV3OR16-10A0A075B7F0 116 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 WIPF1O43516 503 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 LINC00315P59091 139 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 LINC00527Q9UJ94 153 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 MYO9AB2RTY4 2548 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.01□□□□□ -1.93
SOX6-217ENST00000533870 PRO0628Q9UI54 55 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 SELENOKQ9Y6D0 94 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 TCF20Q9UGU0 1960 aaKnown RBP3.01□□□□□ -1.93
SOX6-217ENST00000533870 RP1P56715 2156 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 CLPSL1A2RUU4 121 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 HTN1P15515 57 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 MP68P56378 58 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 COX17Q14061 63 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 PFN2P35080 140 aa3.01□□□□□ -1.93
SOX6-217ENST00000533870 ARFGEF3Q5TH69 2177 aa3□□□□□ -1.93
SOX6-217ENST00000533870 RNF223E7ERA6 249 aa3□□□□□ -1.93
SOX6-217ENST00000533870 ZNF561-AS1K7EIQ3 104 aa3□□□□□ -1.93
SOX6-217ENST00000533870 NBL1P41271 181 aa3□□□□□ -1.93
SOX6-217ENST00000533870 C5orf38Q86SI9 138 aa3□□□□□ -1.93
SOX6-217ENST00000533870 RMI2Q96E14 147 aa3□□□□□ -1.93
SOX6-217ENST00000533870 IGHV3-64A0A075B6Q5 118 aa3□□□□□ -1.93
SOX6-217ENST00000533870 ERC2-IT1O76042 136 aa3□□□□□ -1.93
SOX6-217ENST00000533870 FAM19A3Q7Z5A8 133 aa3□□□□□ -1.93
SOX6-217ENST00000533870 ASXL3Q9C0F0 2248 aa3□□□□□ -1.93
SOX6-217ENST00000533870 A8MTW9 85 aa3□□□□□ -1.93
SOX6-217ENST00000533870 F8W735 103 aaPredicted RBP3□□□□□ -1.93
SOX6-217ENST00000533870 DCANP1Q8TF63 244 aa3□□□□□ -1.93
SOX6-217ENST00000533870 PKDREJQ9NTG1 2253 aa3□□□□□ -1.93
SOX6-217ENST00000533870 Q8IZM0 81 aa3□□□□□ -1.93
SOX6-217ENST00000533870 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
SOX6-217ENST00000533870 CCDC179H3BU77 68 aa3□□□□□ -1.93
SOX6-217ENST00000533870 HOXD3P31249 432 aaPredicted RBP3□□□□□ -1.93
SOX6-217ENST00000533870 CCL19Q99731 98 aa3□□□□□ -1.93
SOX6-217ENST00000533870 UBE2D4Q9Y2X8 147 aa3□□□□□ -1.93
SOX6-217ENST00000533870 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 FAM19A4Q96LR4 140 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 TLN1Q9Y490 2541 aaKnown RBP2.99□□□□□ -1.93
SOX6-217ENST00000533870 LINC00242Q5T6M2 205 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 C20orf197Q8N268 126 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 GREB1Q4ZG55 1949 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 CACNA1BQ00975 2339 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 MUC22E2RYF6 1773 aaPredicted RBP2.99□□□□□ -1.93
SOX6-217ENST00000533870 A0A1W2PNU3 283 aaPredicted RBP2.99□□□□□ -1.93
SOX6-217ENST00000533870 C11orf71Q6IPW1 123 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 SMIM1B2RUZ4 78 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 IGKV3-20P01619 116 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 SPRNQ5BIV9 151 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 CLEC2BQ92478 149 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 PRO0255Q9UI72 69 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 BLCAPP62952 87 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 Q8NA96 180 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 DIRC1Q969H9 104 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 ZNF625Q96I27 306 aaPredicted RBP2.99□□□□□ -1.93
SOX6-217ENST00000533870 PRO3102Q9H379 93 aa2.99□□□□□ -1.93
SOX6-217ENST00000533870 SPTBP11277 2137 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 INTS1Q8N201 2190 aaKnown RBP2.98□□□□□ -1.93
SOX6-217ENST00000533870 ABCA7Q8IZY2 2146 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 LRRK1Q38SD2 2015 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 A0A0U1RRA0 63 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 NREPQ16612 68 aa2.98□□□□□ -1.93
SOX6-217ENST00000533870 AKAP6Q13023 2319 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms