RNA–Protein interactions for RNA: ENST00000532461.5

RDX-213, Transcript of radixin, humanhuman

TSL 1 (best)

Gene RDX, Length 3,286 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-213ENST00000532461 SYNJ2BPP57105 145 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
RDX-213ENST00000532461 SBSPONQ8IVN8 264 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 FAM110AQ9BQ89 295 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 HOXA3O43365 443 aaPredicted RBP4.23□□□□□ -1.73
RDX-213ENST00000532461 TGFAP01135 160 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 IGHV3-30P01768 117 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 IGHV3-30-5P0DP03 117 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 ATP6V0E2Q8NHE4 81 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 SPXQ9BT56 116 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 TIMM21Q9BVV7 248 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 CSMD2Q7Z408 3487 aa4.23□□□□□ -1.73
RDX-213ENST00000532461 USP24Q9UPU5 2620 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 M0R2P5 195 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 SPRY2O43597 315 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 SRD5A1P18405 259 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 HERVK_113P61574 105 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 ANK3Q12955 4377 aaKnown RBP4.22□□□□□ -1.73
RDX-213ENST00000532461 IGLV4-3A0A075B6K6 122 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 RS1O15537 224 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 TSPEAR-AS2P59090 65 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 NRGNQ92686 78 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 HIST1H4GQ99525 98 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 C16orf95Q9H693 158 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 COL12A1Q99715 3063 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 A0A087WWL8 130 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 J3KRW8 73 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 K7ERJ3 54 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 RPL39P62891 51 aaKnown RBP4.22□□□□□ -1.73
RDX-213ENST00000532461 DEFB114Q30KQ6 69 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 PLEKHB2Q96CS7 222 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 BBC3Q96PG8 261 aaPredicted RBP4.22□□□□□ -1.73
RDX-213ENST00000532461 MAP6D1Q9H9H5 199 aa4.22□□□□□ -1.73
RDX-213ENST00000532461 NHP2Q9NX24 153 aaKnown RBP4.22□□□□□ -1.73
RDX-213ENST00000532461 RHODO00212 210 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 IGHV3-53P01767 116 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 SPINK13Q1W4C9 94 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 CFAP126Q5VTH2 177 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 ZNF479Q96JC4 524 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 CHCHD7Q9BUK0 85 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 SPANXA1Q9NS26 97 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 DOPEY2Q9Y3R5 2298 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 TRAV12-2A0A075B6T6 113 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 TINCRA0A1B0GVN0 87 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 ZNF815PA8K554 130 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 ZNF22P17026 224 aaPredicted RBP4.21□□□□□ -1.74
RDX-213ENST00000532461 NDUFA11Q86Y39 141 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 MED13LQ71F56 2210 aa4.21□□□□□ -1.74
RDX-213ENST00000532461 PDZD2O15018 2839 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 ZANQ9Y493 2812 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 A0A0B4J2C4 111 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 ZNF415Q09FC8 603 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 LITAFQ99732 161 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 CSDC2Q9Y534 153 aaKnown RBP4.2□□□□□ -1.74
RDX-213ENST00000532461 J3QQQ9 107 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 TIMM17BO60830 172 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 SLURP1P55000 103 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 RAB37Q96AX2 223 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 APCP25054 2843 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 NBPF19A0A087WUL8 3843 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 AKAP6Q13023 2319 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 TSPAN13O95857 204 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 TCTAP57738 103 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 KRTAP10-9P60411 292 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 SPATA25Q9BR10 227 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 SPANXDQ9BXN6 97 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 SPANXCQ9NY87 97 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 UBE2D4Q9Y2X8 147 aa4.2□□□□□ -1.74
RDX-213ENST00000532461 NBASA2RRP1 2371 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 IGKV3-7A0A075B6H7 116 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 H3BMG7 143 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 CFC1BP0CG36 223 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 CFC1P0CG37 223 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 SCGB1A1P11684 91 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 TIRAPP58753 221 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 ZNF56Q15929 161 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 C18orf65Q6ZTR6 163 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 TMEM61Q8N0U2 210 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 SPTAN1Q13813 2472 aaKnown RBP4.19□□□□□ -1.74
RDX-213ENST00000532461 TRBV20-1A0A075B6N2 111 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 EIF4EBP3O60516 100 aaPredicted RBP4.19□□□□□ -1.74
RDX-213ENST00000532461 SAP30O75446 220 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 CMC4P56277 68 aaPredicted RBP4.19□□□□□ -1.74
RDX-213ENST00000532461 KRTAP1-1Q07627 177 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 RNF151Q2KHN1 245 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 Q6ZSV7 163 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 TEX15Q9BXT5 2789 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 A0A0J9YXY3 114 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 INSP01308 110 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 DEFB131AP59861 70 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 KLHL30-AS1Q8NEE0 82 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 TMEM263Q8WUH6 116 aaKnown RBP4.19□□□□□ -1.74
RDX-213ENST00000532461 DUX5Q96PT3 197 aa4.19□□□□□ -1.74
RDX-213ENST00000532461 KNCNA6PVL3 124 aa4.18□□□□□ -1.74
RDX-213ENST00000532461 TMEM238C9JI98 176 aa4.18□□□□□ -1.74
RDX-213ENST00000532461 F5H697 171 aa4.18□□□□□ -1.74
RDX-213ENST00000532461 ODF3L2Q3SX64 289 aa4.18□□□□□ -1.74
RDX-213ENST00000532461 CD300EQ496F6 205 aaPredicted RBP4.18□□□□□ -1.74
RDX-213ENST00000532461 Q6ZSN1 163 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms