RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 APRG1Q8IVJ8 170 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 PIMREGQ9BSJ6 248 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 TRAV12-2A0A075B6T6 113 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 NDUFB3O43676 98 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 NPC2P61916 151 aa6.04□□□□□ -1.44
CSDE1-214ENST00000530886 CADP27708 2225 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 IGHV1-58A0A0C4DH39 117 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 TRAV21A0A0B4J279 112 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 MGPP08493 103 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 SYNJ2BPP57105 145 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 MRPS36P82909 103 aaKnown RBP6.03□□□□□ -1.44
CSDE1-214ENST00000530886 PRR9Q5T870 116 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 RNF182Q8N6D2 247 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 OBSCN-AS1Q96MR7 158 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 PHLDA3Q9Y5J5 127 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 MUC4Q99102 2169 aa6.03□□□□□ -1.44
CSDE1-214ENST00000530886 USP17L23D6RBM5 183 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 SEC61GP60059 68 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 KLRB1Q12918 225 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 FHL2Q14192 279 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 LINC01561Q8N1V8 128 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 CNEP1R1Q8N9A8 125 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 MAFAQ8NHW3 353 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-214ENST00000530886 C16orf95Q9H693 158 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 ATMQ13315 3056 aa6.02□□□□□ -1.45
CSDE1-214ENST00000530886 ASH1LQ9NR48 2969 aaKnown RBP6.01□□□□□ -1.45
CSDE1-214ENST00000530886 PLCE1Q9P212 2302 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 BAALC-AS2P0C853 105 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 ZFAND2AQ8N6M9 145 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 ZGRF1Q86YA3 2104 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 RNASE3P12724 160 aaKnown RBP6.01□□□□□ -1.45
CSDE1-214ENST00000530886 SUMO4Q6EEV6 95 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 Q6ZSV7 163 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 ITLN2Q8WWU7 325 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-214ENST00000530886 TMEM178BH3BS89 294 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 BCE1O60756 84 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 PRSS2P07478 247 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 NUP37Q8NFH4 326 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 C10orf105Q8TEF2 133 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 NDUFA12Q9UI09 145 aa6.01□□□□□ -1.45
CSDE1-214ENST00000530886 TECTAO75443 2155 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 IGLV4-3A0A075B6K6 122 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 LYPD2Q6UXB3 125 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 C20orf203Q8NBC4 194 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 VSIG2Q96IQ7 327 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 UBE2D4Q9Y2X8 147 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 ABCA1O95477 2261 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 A0A0J9YXV3 536 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 CLPSL1A2RUU4 121 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 M0R1B8 84 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 FAM236CP0DP71 79 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 C9orf139Q6ZV77 190 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 C1orf43Q9BWL3 253 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 ZNF580Q9UK33 172 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 U3KQE9 123 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 CUL9Q8IWT3 2517 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 M0R1W7 72 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 S100A4P26447 101 aaKnown RBP6□□□□□ -1.45
CSDE1-214ENST00000530886 COPS9Q8WXC6 57 aa6□□□□□ -1.45
CSDE1-214ENST00000530886 RPL35AP18077 110 aaKnown RBP5.99□□□□□ -1.45
CSDE1-214ENST00000530886 HRNRQ86YZ3 2850 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-214ENST00000530886 PATE3B3GLJ2 98 aa5.99□□□□□ -1.45
CSDE1-214ENST00000530886 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
CSDE1-214ENST00000530886 VMO1Q7Z5L0 202 aa5.99□□□□□ -1.45
CSDE1-214ENST00000530886 MBD3L2Q8NHZ7 208 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-214ENST00000530886 OVOL2Q9BRP0 275 aa5.99□□□□□ -1.45
CSDE1-214ENST00000530886 S4R3C0 116 aa5.99□□□□□ -1.45
CSDE1-214ENST00000530886 V9GYY9 64 aa5.99□□□□□ -1.45
CSDE1-214ENST00000530886 IGHV3-64A0A075B6Q5 118 aa5.98□□□□□ -1.45
CSDE1-214ENST00000530886 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
CSDE1-214ENST00000530886 NDUFA1O15239 70 aa5.98□□□□□ -1.45
CSDE1-214ENST00000530886 Q8N2B8 174 aa5.98□□□□□ -1.45
CSDE1-214ENST00000530886 FAM223BA6NKX1 122 aa5.98□□□□□ -1.45
CSDE1-214ENST00000530886 FAM104AQ969W3 186 aa5.98□□□□□ -1.45
CSDE1-214ENST00000530886 AKAP9Q99996 3911 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 IGHG2P01859 326 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 IGFL2Q6UWQ7 119 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 OPRPNQ99935 248 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-214ENST00000530886 AKAP13Q12802 2813 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 CELSR1Q9NYQ6 3014 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 DNAL4O96015 105 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 FAM110DQ8TAY7 271 aaPredicted RBP5.97□□□□□ -1.45
CSDE1-214ENST00000530886 LINC00308Q8TCZ7 52 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 TMEM243Q9BU79 118 aa5.97□□□□□ -1.45
CSDE1-214ENST00000530886 NBPF19A0A087WUL8 3843 aa5.96□□□□□ -1.45
CSDE1-214ENST00000530886 TRBV10-3A0A0K0K1G6 114 aa5.96□□□□□ -1.45
CSDE1-214ENST00000530886 ADARB2-AS1A8MUL3 147 aa5.96□□□□□ -1.45
CSDE1-214ENST00000530886 LYPD5Q6UWN5 251 aa5.96□□□□□ -1.45
CSDE1-214ENST00000530886 ZNF576Q9H609 170 aa5.96□□□□□ -1.45
CSDE1-214ENST00000530886 CEP290O15078 2479 aa5.96□□□□□ -1.46
CSDE1-214ENST00000530886 M0QY20 66 aa5.96□□□□□ -1.46
CSDE1-214ENST00000530886 LY6G5BQ8NDX9 201 aa5.96□□□□□ -1.46
CSDE1-214ENST00000530886 PF4P02776 101 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 LINC00846Q9NV44 126 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 IGLV5-45A0A087WSX0 123 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 H7BZZ5 65 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 AVPP01185 164 aa5.95□□□□□ -1.46
CSDE1-214ENST00000530886 CIRBPQ14011 172 aaKnown RBP5.95□□□□□ -1.46
CSDE1-214ENST00000530886 S100A7L2Q5SY68 101 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms