RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
PCF11-204ENST00000530660 NUP37Q8NFH4 326 aa10.55□□□□□ -0.72
PCF11-204ENST00000530660 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
PCF11-204ENST00000530660 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
PCF11-204ENST00000530660 CLPSL1A2RUU4 121 aa10.55□□□□□ -0.72
PCF11-204ENST00000530660 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
PCF11-204ENST00000530660 NDPQ00604 133 aa10.55□□□□□ -0.72
PCF11-204ENST00000530660 A0A087WWL8 130 aa10.54□□□□□ -0.72
PCF11-204ENST00000530660 ATOX1O00244 68 aa10.54□□□□□ -0.72
PCF11-204ENST00000530660 TMEM258P61165 79 aa10.54□□□□□ -0.72
PCF11-204ENST00000530660 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
PCF11-204ENST00000530660 C10orf105Q8TEF2 133 aa10.54□□□□□ -0.72
PCF11-204ENST00000530660 PEMTQ9UBM1 199 aa10.54□□□□□ -0.72
PCF11-204ENST00000530660 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
PCF11-204ENST00000530660 F5H697 171 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 HIST1H4AP62805 103 aaKnown RBP10.53□□□□□ -0.72
PCF11-204ENST00000530660 C9orf47Q6ZRZ4 202 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 ZFAND3Q9H8U3 227 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 CXCL5P42830 114 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 BSPH1Q075Z2 132 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 TMEM61Q8N0U2 210 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 NBR2O15453 112 aa10.53□□□□□ -0.72
PCF11-204ENST00000530660 M0R1W7 72 aa10.52□□□□□ -0.73
PCF11-204ENST00000530660 LINC00315P59091 139 aa10.52□□□□□ -0.73
PCF11-204ENST00000530660 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
PCF11-204ENST00000530660 IGFL2Q6UWQ7 119 aa10.52□□□□□ -0.73
PCF11-204ENST00000530660 CITED2Q99967 270 aaPredicted RBP10.52□□□□□ -0.73
PCF11-204ENST00000530660 SPANXDQ9BXN6 97 aa10.52□□□□□ -0.73
PCF11-204ENST00000530660 VCYO14598 125 aa10.52□□□□□ -0.73
PCF11-204ENST00000530660 SPTBN1Q01082 2364 aaKnown RBP10.52□□□□□ -0.73
PCF11-204ENST00000530660 A0A087WVE0 104 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 A0A0J9YX75 114 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 LYNX1G3V0Z9 82 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 LYNX1P0DP58 116 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 TIRAPP58753 221 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 DCHS2Q6V1P9 2916 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 PPP1R17O96001 155 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 KAAG1Q9UBP8 84 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 MRAPQ8TCY5 172 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 APC2O95996 2303 aa10.51□□□□□ -0.73
PCF11-204ENST00000530660 IGKV3D-7A0A0C4DH55 119 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 RNASE3P12724 160 aaKnown RBP10.5□□□□□ -0.73
PCF11-204ENST00000530660 DEFB109BQ30KR1 87 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 VMO1Q7Z5L0 202 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 UPK3BQ9BT76 320 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 LRBAP50851 2863 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 NXPH4O95158 308 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 RPL18AQ02543 176 aaKnown RBP10.5□□□□□ -0.73
PCF11-204ENST00000530660 SPANXCQ9NY87 97 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 ZFAND2AQ8N6M9 145 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 NDUFA12Q9UI09 145 aa10.5□□□□□ -0.73
PCF11-204ENST00000530660 RNASE4P34096 147 aaKnown RBP10.49□□□□□ -0.73
PCF11-204ENST00000530660 UCNP55089 124 aa10.49□□□□□ -0.73
PCF11-204ENST00000530660 MIAQ16674 131 aa10.49□□□□□ -0.73
PCF11-204ENST00000530660 RNASE6Q93091 150 aaKnown RBP10.49□□□□□ -0.73
PCF11-204ENST00000530660 DYNLRB1Q9NP97 96 aa10.49□□□□□ -0.73
PCF11-204ENST00000530660 KIF25-AS1Q9Y6Z4 181 aa10.49□□□□□ -0.73
PCF11-204ENST00000530660 FAM74A4Q5TZK3 123 aa10.49□□□□□ -0.73
PCF11-204ENST00000530660 ASH1LQ9NR48 2969 aaKnown RBP10.48□□□□□ -0.73
PCF11-204ENST00000530660 IGHV4OR15-8A0A075B7B6 117 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 A0A087WW49 117 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 C20orf173Q96LM9 149 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 LY6LH3BQJ8 138 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 J3QLI3 93 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 BAALC-AS2P0C853 105 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 RNASE13Q5GAN3 156 aaKnown RBP10.48□□□□□ -0.73
PCF11-204ENST00000530660 SERP2Q8N6R1 65 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 C16orf92Q96LL3 132 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 C22orf24Q9Y442 160 aa10.48□□□□□ -0.73
PCF11-204ENST00000530660 RNF5Q99942 180 aa10.47□□□□□ -0.73
PCF11-204ENST00000530660 IGHV3OR16-10A0A075B7F0 116 aa10.47□□□□□ -0.73
PCF11-204ENST00000530660 TRAV21A0A0B4J279 112 aa10.47□□□□□ -0.73
PCF11-204ENST00000530660 LINC00336Q6ZUF6 198 aa10.47□□□□□ -0.73
PCF11-204ENST00000530660 SPTBN2O15020 2390 aa10.47□□□□□ -0.73
PCF11-204ENST00000530660 C1orf43Q9BWL3 253 aa10.46□□□□□ -0.73
PCF11-204ENST00000530660 RPL11P62913 178 aaKnown RBP10.46□□□□□ -0.73
PCF11-204ENST00000530660 C15orf32Q32M92 178 aa10.46□□□□□ -0.73
PCF11-204ENST00000530660 TRBV27A0A0K0K1C4 114 aa10.46□□□□□ -0.74
PCF11-204ENST00000530660 Q8N2B8 174 aa10.46□□□□□ -0.74
PCF11-204ENST00000530660 IGHV1-69P01742 117 aa10.45□□□□□ -0.74
PCF11-204ENST00000530660 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
PCF11-204ENST00000530660 A0A0U1RRA0 63 aa10.45□□□□□ -0.74
PCF11-204ENST00000530660 F6UB75 175 aa10.45□□□□□ -0.74
PCF11-204ENST00000530660 PKIGQ9Y2B9 76 aa10.45□□□□□ -0.74
PCF11-204ENST00000530660 FHL2Q14192 279 aa10.45□□□□□ -0.74
PCF11-204ENST00000530660 CLEC19AQ6UXS0 136 aa10.44□□□□□ -0.74
PCF11-204ENST00000530660 COX7A2LO14548 114 aa10.43□□□□□ -0.74
PCF11-204ENST00000530660 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
PCF11-204ENST00000530660 Q9HAA7 133 aa10.43□□□□□ -0.74
PCF11-204ENST00000530660 PFN2P35080 140 aa10.43□□□□□ -0.74
PCF11-204ENST00000530660 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
PCF11-204ENST00000530660 LINC01561Q8N1V8 128 aa10.43□□□□□ -0.74
PCF11-204ENST00000530660 NPBQ8NG41 125 aa10.43□□□□□ -0.74
PCF11-204ENST00000530660 FAM218AQ96MZ4 157 aa10.43□□□□□ -0.74
PCF11-204ENST00000530660 E7EQL1 145 aa10.42□□□□□ -0.74
PCF11-204ENST00000530660 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
PCF11-204ENST00000530660 USP17L23D6RBM5 183 aa10.42□□□□□ -0.74
PCF11-204ENST00000530660 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
PCF11-204ENST00000530660 C20orf203Q8NBC4 194 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms