RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 ZNF331Q9NQX6 463 aaPredicted RBP4.63□□□□□ -1.67
ATPAF1-209ENST00000529214 TRBV20-1A0A075B6N2 111 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 FAM236AA0A1B0GUQ0 79 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 FAM236BA0A1B0GV22 79 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 A0A1W2PPM0 123 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 RBMY1BA6NDE4 496 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 RBMY1EA6NEQ0 496 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 K7EQG2 157 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 RBMY1DP0C7P1 496 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 PFN2P35080 140 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 ODF3L2Q3SX64 289 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 C9orf153Q5TBE3 101 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 ATOH7Q8N100 152 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 PRR26Q8N8Z3 221 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 GNPNAT1Q96EK6 184 aaPredicted RBP4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 C2orf48Q96LS8 159 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 WFDC10AQ9H1F0 79 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 UBE2L5PA0A1B0GUS4 154 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 FAM240AA0A1B0GVK7 77 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 H3BRN7 92 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 P01737 135 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 MIC13Q5XKP0 118 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 SCGB1C1Q8TD33 95 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 C17orf77Q96MU5 243 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 PYGO2Q9BRQ0 406 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 SHANK2-AS3Q9BTD1 123 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 EIF5A2Q9GZV4 153 aaKnown RBP4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 MAP6D1Q9H9H5 199 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 NRN1Q9NPD7 142 aa4.62□□□□□ -1.67
ATPAF1-209ENST00000529214 HUWE1Q7Z6Z7 4374 aaKnown RBP4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 H3BUT2 72 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 SNCGO76070 127 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 SLC25A5P05141 298 aaKnown RBP4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 FGF6P10767 208 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 NMUP48645 174 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 DEFB131AP59861 70 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 PAPPA-AS1Q5QFB9 102 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 LINC00305Q7Z4B0 112 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 AQP10Q96PS8 301 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 C20orf78Q9BR46 151 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 SCRT1Q9BWW7 348 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 NPCDR1Q9BY65 106 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 SLC25A22Q9H936 323 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 SLC39A9Q9NUM3 307 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 PYGO1Q9Y3Y4 419 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 PXMP4Q9Y6I8 212 aa4.61□□□□□ -1.67
ATPAF1-209ENST00000529214 TRAV9-2A0A087WT02 112 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 TRAV26-2A0A0B4J265 109 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 SOCS3O14543 225 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 MRPS12O15235 138 aaKnown RBP4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 COX7A2P2O60397 106 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 NCR2O95944 276 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 OR5AL1P0C617 328 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 ZNF688P0C7X2 276 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 BCL2P10415 239 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 TMEM258P61165 79 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 C10orf113Q5VZT2 155 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 C3orf22Q8N5N4 141 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 Q8N976 141 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 PMCHL2Q9BQD1 86 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 TM2D3Q9BRN9 247 aa4.6□□□□□ -1.67
ATPAF1-209ENST00000529214 C17orf112F2Z3M2 114 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 UQCRQO14949 82 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 ZNF253O75346 499 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 SNRPD3P62318 126 aaKnown RBP4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 MORN5Q5VZ52 161 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 BPIFA4PQ86YQ2 179 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 DPH3Q96FX2 82 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 ZC2HC1AQ96GY0 325 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 COL7A1Q02388 2944 aa4.59□□□□□ -1.67
ATPAF1-209ENST00000529214 A0A0U1RQV1 116 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 GRIFINA4D1Z8 144 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 H7C1H1 209 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 JTBO76095 146 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 DUSP14O95147 198 aaKnown RBP4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 APOMO95445 188 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 PSMB3P49720 205 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 APOC4P55056 127 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 FOXA3P55318 350 aaPredicted RBP4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 KRTDAPP60985 99 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 PSMG4Q5JS54 123 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 PIK3CD-AS1Q5SR53 167 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 MORN3Q6PF18 240 aaPredicted RBP4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 AMTNQ6UX39 209 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 C18orf32Q8TCD1 76 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 VGLL1Q99990 258 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 U3KQK5 164 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 TGP01266 2768 aa4.58□□□□□ -1.68
ATPAF1-209ENST00000529214 TRAV8-2A0A0B4J237 113 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 A0A1B0GWB2 263 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 KNCNA6PVL3 124 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 H3BMM0 161 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 ATP5G3P48201 142 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 TAS2R45P59539 299 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 SLC25A34Q6PIV7 304 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 Q6ZSN1 163 aa4.57□□□□□ -1.68
ATPAF1-209ENST00000529214 MIR17HGQ75NE6 70 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms