RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 OR10G8Q8NGN5 311 aa4.72□□□□□ -1.65
ITGB1-218ENST00000528877 CHCHD7Q9BUK0 85 aa4.72□□□□□ -1.65
ITGB1-218ENST00000528877 JPT2Q9H910 190 aa4.72□□□□□ -1.65
ITGB1-218ENST00000528877 PHLDA3Q9Y5J5 127 aa4.72□□□□□ -1.65
ITGB1-218ENST00000528877 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
ITGB1-218ENST00000528877 GRIFINA4D1Z8 144 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 M0R381 172 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 RPL35P42766 123 aaKnown RBP4.71□□□□□ -1.66
ITGB1-218ENST00000528877 GAGE1Q13065 139 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 GAGE4Q13068 117 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 GAGE5Q13069 117 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 PRR27Q6MZM9 219 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 SLC51BQ86UW2 128 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 BAGE2Q86Y30 109 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 C14orf178Q8N769 122 aaPredicted RBP4.71□□□□□ -1.66
ITGB1-218ENST00000528877 Q9UF83 564 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 DNAH8Q96JB1 4490 aa4.71□□□□□ -1.66
ITGB1-218ENST00000528877 SRRM2Q9UQ35 2752 aaKnown RBP4.7□□□□□ -1.66
ITGB1-218ENST00000528877 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 A0A1B0GV50 99 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 TEX46H3BTG2 121 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 PDE6DO43924 150 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 IGLV2-8P01709 118 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 TAGLN2P37802 199 aaKnown RBP4.7□□□□□ -1.66
ITGB1-218ENST00000528877 RAB4BP61018 213 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 UBE2D3P61077 147 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 SUMO2P61956 95 aaKnown RBP4.7□□□□□ -1.66
ITGB1-218ENST00000528877 UBE2D2P62837 147 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 CCL20P78556 96 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 MEF2BQ02080 365 aaPredicted RBP4.7□□□□□ -1.66
ITGB1-218ENST00000528877 FAM74A4Q5TZK3 123 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 OR10AG1Q8NH19 301 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 DERL1Q9BUN8 251 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 GNG13Q9P2W3 67 aa4.7□□□□□ -1.66
ITGB1-218ENST00000528877 MYCBP2O75592 4640 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 TRBV20OR9-2A0A075B6H5 130 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 TRAV8-3A0A0A6YYJ7 113 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 C19orf71A6NCJ1 209 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 IFNA1P01562 189 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 IGLC6P0CF74 106 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 BCL2P10415 239 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
ITGB1-218ENST00000528877 RPL19P84098 196 aaKnown RBP4.69□□□□□ -1.66
ITGB1-218ENST00000528877 CENPWQ5EE01 88 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 ATRAIDQ6UW56 229 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 NIT1Q86X76 327 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 C9orf62Q8N4C0 152 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 Q8N814 137 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 RPL36ALQ969Q0 106 aaKnown RBP4.69□□□□□ -1.66
ITGB1-218ENST00000528877 AP1S3Q96PC3 154 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 TMEM70Q9BUB7 260 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 TM2D2Q9BX73 214 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 VAX2Q9UIW0 290 aa4.69□□□□□ -1.66
ITGB1-218ENST00000528877 TRBV7-3A0A075B6L6 115 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 PSCAO43653 123 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 IGHV3-30P01768 117 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 IGHV3-33P01772 117 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 IGHV3-30-3P0DP02 117 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 IGHV3-30-5P0DP03 117 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 XGP55808 180 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 KRTAP10-1P60331 282 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 RPS20P60866 119 aaKnown RBP4.68□□□□□ -1.66
ITGB1-218ENST00000528877 CNFNQ9BYD5 112 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 Q9HAA7 133 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 KIF25-AS1Q9Y6Z4 181 aa4.68□□□□□ -1.66
ITGB1-218ENST00000528877 IGLV5-52A0A0A0MRZ9 124 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 TRBV6-8A0A0A6YYG3 113 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 CTRLP40313 264 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 GNG4P50150 75 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 PKIAP61925 76 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 ZNF56Q15929 161 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 SPANXN1Q5VSR9 72 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 DAZ4Q86SG3 579 aaKnown RBP4.67□□□□□ -1.66
ITGB1-218ENST00000528877 AKAP14Q86UN6 197 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 FER1L6-AS1Q8NA97 138 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 LYPD6BQ8NI32 183 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 RMI2Q96E14 147 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 BIN3Q9NQY0 253 aa4.67□□□□□ -1.66
ITGB1-218ENST00000528877 DAZ3Q9NR90 486 aaKnown RBP4.67□□□□□ -1.66
ITGB1-218ENST00000528877 HERC1Q15751 4861 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 XKRY2A2RUG3 117 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 RBFOX3A6NFN3 312 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 F2Z2F3 143 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 TMEM250H0YL14 139 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 NDUFS6O75380 124 aaKnown RBP4.66□□□□□ -1.66
ITGB1-218ENST00000528877 FUSP35637 526 aaKnown RBP eCLIP4.66□□□□□ -1.66
ITGB1-218ENST00000528877 CACNG7P62955 275 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 WFDC2Q14508 124 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 ELOBQ15370 118 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 TMEM97Q5BJF2 176 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 Q6ZSA8 131 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 OR2D3Q8NGH3 330 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 URGCP-MRPS24S4R325 110 aa4.66□□□□□ -1.66
ITGB1-218ENST00000528877 DMBT1Q9UGM3 2413 aaPredicted RBP4.65□□□□□ -1.66
ITGB1-218ENST00000528877 A0A087WX48 190 aa4.65□□□□□ -1.67
ITGB1-218ENST00000528877 M0QY20 66 aa4.65□□□□□ -1.67
ITGB1-218ENST00000528877 P01737 135 aa4.65□□□□□ -1.67
ITGB1-218ENST00000528877 SMIM17P0DL12 118 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms