RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 TOR2AQ5JU69 321 aa10.37□□□□□ -0.75
CAPN1-213ENST00000527897 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-213ENST00000527897 OR10G8Q8NGN5 311 aa10.37□□□□□ -0.75
CAPN1-213ENST00000527897 KLK12Q9UKR0 248 aa10.37□□□□□ -0.75
CAPN1-213ENST00000527897 IGLV5-52A0A0A0MRZ9 124 aa10.36□□□□□ -0.75
CAPN1-213ENST00000527897 LECT2O14960 151 aa10.36□□□□□ -0.75
CAPN1-213ENST00000527897 CACNG7P62955 275 aa10.36□□□□□ -0.75
CAPN1-213ENST00000527897 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
CAPN1-213ENST00000527897 NUDT10Q8NFP7 164 aa10.36□□□□□ -0.75
CAPN1-213ENST00000527897 NUDT11Q96G61 164 aa10.36□□□□□ -0.75
CAPN1-213ENST00000527897 GCSHP23434 173 aa10.35□□□□□ -0.75
CAPN1-213ENST00000527897 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
CAPN1-213ENST00000527897 UBE2WQ96B02 151 aa10.35□□□□□ -0.75
CAPN1-213ENST00000527897 DNAJC30Q96LL9 226 aa10.35□□□□□ -0.75
CAPN1-213ENST00000527897 RNASE7Q9H1E1 156 aaKnown RBP10.35□□□□□ -0.75
CAPN1-213ENST00000527897 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
CAPN1-213ENST00000527897 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
CAPN1-213ENST00000527897 TRBV6-8A0A0A6YYG3 113 aa10.34□□□□□ -0.75
CAPN1-213ENST00000527897 F2Z2F3 143 aa10.34□□□□□ -0.75
CAPN1-213ENST00000527897 K7EN84 100 aa10.34□□□□□ -0.75
CAPN1-213ENST00000527897 Q8N814 137 aa10.34□□□□□ -0.75
CAPN1-213ENST00000527897 OCC1Q8TAD7 63 aa10.34□□□□□ -0.75
CAPN1-213ENST00000527897 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
CAPN1-213ENST00000527897 TRGC1P0CF51 173 aa10.33□□□□□ -0.76
CAPN1-213ENST00000527897 WFDC2Q14508 124 aa10.33□□□□□ -0.76
CAPN1-213ENST00000527897 ELOBQ15370 118 aa10.33□□□□□ -0.76
CAPN1-213ENST00000527897 RMI2Q96E14 147 aa10.33□□□□□ -0.76
CAPN1-213ENST00000527897 EIF5A2Q9GZV4 153 aaKnown RBP10.33□□□□□ -0.76
CAPN1-213ENST00000527897 RPP21Q9H633 154 aaKnown RBP10.33□□□□□ -0.76
CAPN1-213ENST00000527897 NTF3P20783 257 aa10.32□□□□□ -0.76
CAPN1-213ENST00000527897 SUMO4Q6EEV6 95 aa10.32□□□□□ -0.76
CAPN1-213ENST00000527897 Q8N1X5 172 aa10.32□□□□□ -0.76
CAPN1-213ENST00000527897 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
CAPN1-213ENST00000527897 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
CAPN1-213ENST00000527897 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.31□□□□□ -0.76
CAPN1-213ENST00000527897 TMEM250H0YL14 139 aa10.31□□□□□ -0.76
CAPN1-213ENST00000527897 H7C1H1 209 aa10.31□□□□□ -0.76
CAPN1-213ENST00000527897 ANGP03950 147 aaKnown RBP10.31□□□□□ -0.76
CAPN1-213ENST00000527897 TWIST1Q15672 202 aa10.31□□□□□ -0.76
CAPN1-213ENST00000527897 MPV17L2Q567V2 206 aa10.31□□□□□ -0.76
CAPN1-213ENST00000527897 NTN5Q8WTR8 489 aaPredicted RBP10.31□□□□□ -0.76
CAPN1-213ENST00000527897 CHCHD7Q9BUK0 85 aa10.31□□□□□ -0.76
CAPN1-213ENST00000527897 M0QY20 66 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
CAPN1-213ENST00000527897 CRPP02741 224 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 CTRLP40313 264 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 HAMPP81172 84 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 LYPD6BQ8NI32 183 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 COX11Q9Y6N1 276 aa10.3□□□□□ -0.76
CAPN1-213ENST00000527897 TRBV25-1A0A075B6N4 114 aa10.29□□□□□ -0.76
CAPN1-213ENST00000527897 XGP55808 180 aa10.29□□□□□ -0.76
CAPN1-213ENST00000527897 GAGE6Q13070 117 aa10.29□□□□□ -0.76
CAPN1-213ENST00000527897 TMEM97Q5BJF2 176 aa10.29□□□□□ -0.76
CAPN1-213ENST00000527897 Q8N976 141 aa10.29□□□□□ -0.76
CAPN1-213ENST00000527897 DEFB104AQ8WTQ1 72 aa10.29□□□□□ -0.76
CAPN1-213ENST00000527897 RASL11AQ6T310 242 aa10.28□□□□□ -0.76
CAPN1-213ENST00000527897 SMIM7Q9BQ49 75 aa10.28□□□□□ -0.76
CAPN1-213ENST00000527897 IGHV1-24A0A0C4DH33 117 aa10.27□□□□□ -0.77
CAPN1-213ENST00000527897 PKIAP61925 76 aa10.27□□□□□ -0.77
CAPN1-213ENST00000527897 Q0VG73 95 aa10.27□□□□□ -0.77
CAPN1-213ENST00000527897 ATRAIDQ6UW56 229 aa10.27□□□□□ -0.77
CAPN1-213ENST00000527897 CLPSL2Q6UWE3 100 aa10.27□□□□□ -0.77
CAPN1-213ENST00000527897 C1orf43Q9BWL3 253 aa10.27□□□□□ -0.77
CAPN1-213ENST00000527897 EPM2AB3EWF7 344 aa10.26□□□□□ -0.77
CAPN1-213ENST00000527897 WDR73Q6P4I2 378 aa10.26□□□□□ -0.77
CAPN1-213ENST00000527897 ENHOQ6UWT2 76 aa10.26□□□□□ -0.77
CAPN1-213ENST00000527897 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
CAPN1-213ENST00000527897 GTSF1Q8WW33 167 aa10.26□□□□□ -0.77
CAPN1-213ENST00000527897 PGLYRP4Q96LB8 373 aa10.26□□□□□ -0.77
CAPN1-213ENST00000527897 FAM210AQ96ND0 272 aa10.26□□□□□ -0.77
CAPN1-213ENST00000527897 TRAV26-2A0A0B4J265 109 aa10.25□□□□□ -0.77
CAPN1-213ENST00000527897 ZNF727A8MUV8 499 aa10.25□□□□□ -0.77
CAPN1-213ENST00000527897 A8MWL6 223 aa10.25□□□□□ -0.77
CAPN1-213ENST00000527897 SMR3BP02814 79 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-213ENST00000527897 RBX1P62877 108 aa10.25□□□□□ -0.77
CAPN1-213ENST00000527897 NIT2Q9NQR4 276 aa10.25□□□□□ -0.77
CAPN1-213ENST00000527897 HLA-DQA1P01909 254 aa10.24□□□□□ -0.77
CAPN1-213ENST00000527897 SRP19P09132 144 aaKnown RBP10.24□□□□□ -0.77
CAPN1-213ENST00000527897 FOXA3P55318 350 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-213ENST00000527897 IQCJQ1A5X6 159 aa10.24□□□□□ -0.77
CAPN1-213ENST00000527897 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
CAPN1-213ENST00000527897 LINC00269Q8N2A0 174 aa10.24□□□□□ -0.77
CAPN1-213ENST00000527897 CNFNQ9BYD5 112 aa10.24□□□□□ -0.77
CAPN1-213ENST00000527897 LINC01620Q4KN68 170 aa10.23□□□□□ -0.77
CAPN1-213ENST00000527897 LINC01551Q86U37 167 aa10.23□□□□□ -0.77
CAPN1-213ENST00000527897 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
CAPN1-213ENST00000527897 BORCS7Q96B45 105 aa10.23□□□□□ -0.77
CAPN1-213ENST00000527897 TMEM243Q9BU79 118 aa10.23□□□□□ -0.77
CAPN1-213ENST00000527897 FRZBQ92765 325 aa10.22□□□□□ -0.77
CAPN1-213ENST00000527897 TMEM70Q9BUB7 260 aa10.22□□□□□ -0.77
CAPN1-213ENST00000527897 FAM30AQ9NZY2 134 aa10.22□□□□□ -0.77
CAPN1-213ENST00000527897 FAT1Q14517 4588 aa10.21□□□□□ -0.77
CAPN1-213ENST00000527897 UBE2L6O14933 153 aa10.21□□□□□ -0.77
CAPN1-213ENST00000527897 AMTP48728 403 aa10.21□□□□□ -0.77
CAPN1-213ENST00000527897 COTL1Q14019 142 aa10.21□□□□□ -0.77
CAPN1-213ENST00000527897 MIAQ16674 131 aa10.21□□□□□ -0.77
CAPN1-213ENST00000527897 Q5VSD8 79 aa10.21□□□□□ -0.77
CAPN1-213ENST00000527897 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms