RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 TRBV10-1A0A0K0K1A3 114 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 NAP1L6A6NFF2 107 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 IFITM10A6NMD0 228 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 TMEM262E9PQX1 116 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 H3BMQ9 156 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 PTTG1O95997 202 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 TCRBP04435 133 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 GTSF1Q8WW33 167 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 IL36BQ9NZH7 164 aa4.97□□□□□ -1.61
USP48-212ENST00000527823 IGLV10-54A0A075B6I4 117 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 TRBV7-3A0A075B6L6 115 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 PRSS47A8MTI9 375 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 TCRAP04437 139 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 S100A4P26447 101 aaKnown RBP4.96□□□□□ -1.62
USP48-212ENST00000527823 TAS2R45P59539 299 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 COX6A2Q02221 97 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 SRSF9Q13242 221 aaKnown RBP eCLIP4.96□□□□□ -1.62
USP48-212ENST00000527823 FAM74A1Q5RGS3 127 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 LINC00269Q8N2A0 174 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 ARL6IP6Q8N6S5 226 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 OR10G8Q8NGN5 311 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 SEC22CQ9BRL7 303 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 MRPS26Q9BYN8 205 aaKnown RBP4.96□□□□□ -1.62
USP48-212ENST00000527823 MBD2Q9UBB5 411 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 PSG8Q9UQ74 426 aa4.96□□□□□ -1.62
USP48-212ENST00000527823 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.95□□□□□ -1.62
USP48-212ENST00000527823 IGKV2-24A0A0C4DH68 120 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 TMBIM6P55061 237 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 RBX1P62877 108 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 MAJINQ3KP22 176 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 ZFP69Q49AA0 526 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 SMUG1Q53HV7 270 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 TRIQKQ629K1 86 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 NTM-AS1Q6ZSK4 140 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 C15orf56Q8N910 161 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 LYPD6BQ8NI32 183 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 DPH3Q96FX2 82 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 SFRP2Q96HF1 295 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 CHCHD5Q9BSY4 110 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 VAX2Q9UIW0 290 aa4.95□□□□□ -1.62
USP48-212ENST00000527823 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 A0A096LNI7 61 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 SERTM2A0A1B0GWG4 89 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 C17orf112F2Z3M2 114 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 FLI1Q01543 452 aaPredicted RBP4.94□□□□□ -1.62
USP48-212ENST00000527823 PRNTQ86SH4 94 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 STPG4Q8N801 248 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 C5orf17Q8NAS9 161 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 OR11H4Q8NGC9 324 aa4.94□□□□□ -1.62
USP48-212ENST00000527823 SDHCQ99643 169 aaPredicted RBP4.94□□□□□ -1.62
USP48-212ENST00000527823 H7C1H1 209 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 M0R381 172 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 HMGB3O15347 200 aaKnown RBP4.93□□□□□ -1.62
USP48-212ENST00000527823 NDUFS6O75380 124 aaKnown RBP4.93□□□□□ -1.62
USP48-212ENST00000527823 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 RAB2AP61019 212 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 PKIAP61925 76 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 REG3AQ06141 175 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 GAGE6Q13070 117 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 UBE2V1Q13404 147 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 C20orf203Q8NBC4 194 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 GFRA4Q9GZZ7 299 aa4.93□□□□□ -1.62
USP48-212ENST00000527823 TRAV6A0A075B6T7 132 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 B4DEV8 164 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 M0R036 132 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 ARL14EPLP0DKL9 152 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 DNLZQ5SXM8 178 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 PRR27Q6MZM9 219 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 Q75L30 129 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 Q86TA4 180 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 ARL2-SNX15V9GYD0 113 aa4.92□□□□□ -1.62
USP48-212ENST00000527823 GRIFINA4D1Z8 144 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 KRBOX1C9JBD0 128 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 NOL3O60936 208 aaKnown RBP4.91□□□□□ -1.62
USP48-212ENST00000527823 S100A5P33763 92 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 ZNF56Q15929 161 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 HIGD2BQ4VC39 106 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 CFAP161Q6P656 301 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 Q6ZRP5 223 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 ZFP82Q8N141 532 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 NUDT15Q9NV35 164 aa4.91□□□□□ -1.62
USP48-212ENST00000527823 IGLV4-60A0A075B6I1 120 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 TRAV34A0A0B4J273 112 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 FAM231BA6NCW3 169 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 K7EQM0 130 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 IL7P13232 177 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 CRIP1P50238 77 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 LRRC37A5PQ49AS3 106 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 INO80EQ8NBZ0 244 aaPredicted RBP4.9□□□□□ -1.63
USP48-212ENST00000527823 PHLDA3Q9Y5J5 127 aa4.9□□□□□ -1.63
USP48-212ENST00000527823 TRBV25-1A0A075B6N4 114 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 TRAV8-4A0A0B4J246 113 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 TRBV6-1A0A0K0K1D8 114 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 CENPXA8MT69 81 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 FABP5P3A8MUU1 101 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 PLA2G10O15496 165 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 SH2D1AO60880 128 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 P01737 135 aa4.89□□□□□ -1.63
USP48-212ENST00000527823 TPT1P13693 172 aaKnown RBP4.89□□□□□ -1.63
USP48-212ENST00000527823 RPS10P46783 165 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms