RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 UBE2E2Q96LR5 201 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 NCOR2Q9Y618 2525 aa5.64□□□□□ -1.51
SOX6-208ENST00000527619 IGHV1-69DA0A0B4J2H0 117 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 HIST1H4AP62805 103 aaKnown RBP5.63□□□□□ -1.51
SOX6-208ENST00000527619 C14orf178Q8N769 122 aaPredicted RBP5.63□□□□□ -1.51
SOX6-208ENST00000527619 RPL39LQ96EH5 51 aaKnown RBP5.63□□□□□ -1.51
SOX6-208ENST00000527619 CELSR3Q9NYQ7 3312 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 H7C423 109 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 TRIAP1O43715 76 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 LOXP28300 417 aaPredicted RBP5.63□□□□□ -1.51
SOX6-208ENST00000527619 MUSTN1Q8IVN3 82 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 PLA2G2DQ9UNK4 145 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 ABCA1O95477 2261 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 CEP295Q9C0D2 2601 aa5.63□□□□□ -1.51
SOX6-208ENST00000527619 CACNA1AO00555 2505 aa5.62□□□□□ -1.51
SOX6-208ENST00000527619 M0R381 172 aa5.62□□□□□ -1.51
SOX6-208ENST00000527619 TSHBP01222 138 aa5.62□□□□□ -1.51
SOX6-208ENST00000527619 ZNF22P17026 224 aaPredicted RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 PRR26Q8N8Z3 221 aa5.62□□□□□ -1.51
SOX6-208ENST00000527619 SYNJ2BPP57105 145 aa5.62□□□□□ -1.51
SOX6-208ENST00000527619 RPL18AQ02543 176 aaKnown RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 DAZ2Q13117 558 aaKnown RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 Q6ZRU5 148 aa5.62□□□□□ -1.51
SOX6-208ENST00000527619 DAZ4Q86SG3 579 aaKnown RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 DAZ1Q9NQZ3 744 aaKnown RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 DAZ3Q9NR90 486 aaKnown RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 COL27A1Q8IZC6 1860 aaPredicted RBP5.62□□□□□ -1.51
SOX6-208ENST00000527619 MED13Q9UHV7 2174 aa5.62□□□□□ -1.51
SOX6-208ENST00000527619 KNCNA6PVL3 124 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 F8W735 103 aaPredicted RBP5.61□□□□□ -1.51
SOX6-208ENST00000527619 PAX4O43316 350 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 LYPD2Q6UXB3 125 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 TMEM141Q96I45 108 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 RNF5Q99942 180 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 IGIPA6NJ69 53 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 LEPROTO15243 131 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 PPP1R17O96001 155 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 PRR15Q8IV56 129 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 LINC00528Q8N1L1 170 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 METTL26Q96S19 204 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 IGLV11-55A0A075B6I3 123 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 BUB1B-PAK6H3BSN5 160 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 IGLV1-47P01700 117 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 COPS9Q8WXC6 57 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 ICOSQ9Y6W8 199 aa5.61□□□□□ -1.51
SOX6-208ENST00000527619 MALRD1Q5VYJ5 2156 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 TMEM223A0PJW6 202 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 K7EMT4 169 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 MGPP08493 103 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 ZNF876PQ49A33 203 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 C9orf139Q6ZV77 190 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 TIMM17AQ99595 171 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 TMEM243Q9BU79 118 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 TPRP12270 2363 aaKnown RBP5.6□□□□□ -1.51
SOX6-208ENST00000527619 A0A0G2JNJ9 132 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 COX6CP09669 75 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 Q9UFV3 132 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 LAMTOR3Q9UHA4 124 aa5.6□□□□□ -1.51
SOX6-208ENST00000527619 CACNA1GO43497 2377 aa5.59□□□□□ -1.51
SOX6-208ENST00000527619 CHD8Q9HCK8 2581 aa5.59□□□□□ -1.51
SOX6-208ENST00000527619 IGHV3-23P01764 117 aa5.59□□□□□ -1.51
SOX6-208ENST00000527619 CADP27708 2225 aa5.59□□□□□ -1.51
SOX6-208ENST00000527619 SS18Q15532 418 aa5.59□□□□□ -1.51
SOX6-208ENST00000527619 AKAP13Q12802 2813 aa5.59□□□□□ -1.51
SOX6-208ENST00000527619 A0A0J9YX75 114 aa5.59□□□□□ -1.52
SOX6-208ENST00000527619 SDHAF1A6NFY7 115 aa5.59□□□□□ -1.52
SOX6-208ENST00000527619 LST1O00453 97 aa5.59□□□□□ -1.52
SOX6-208ENST00000527619 SNRPD3P62318 126 aaKnown RBP5.59□□□□□ -1.52
SOX6-208ENST00000527619 GPHB5Q86YW7 130 aa5.59□□□□□ -1.52
SOX6-208ENST00000527619 CTSGP08311 255 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 APOC4P55056 127 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 PRB3Q04118 309 aaPredicted RBP5.58□□□□□ -1.52
SOX6-208ENST00000527619 FHL2Q14192 279 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 CFAP47Q6ZTR5 3102 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 AHCTF1Q8WYP5 2266 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 RPL39P62891 51 aaKnown RBP5.58□□□□□ -1.52
SOX6-208ENST00000527619 C9orf47Q6ZRZ4 202 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 CLEC2BQ92478 149 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 CCL17Q92583 94 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 PHLDA3Q9Y5J5 127 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 ACACAQ13085 2346 aa5.58□□□□□ -1.52
SOX6-208ENST00000527619 ZGRF1Q86YA3 2104 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 IGHV3OR16-8A0A075B7F1 116 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 TRBV7-1A0A0A6YYK4 115 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 S100A4P26447 101 aaKnown RBP5.57□□□□□ -1.52
SOX6-208ENST00000527619 SAA4P35542 130 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 KAAG1Q9UBP8 84 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 DSPP15924 2871 aaKnown RBP5.57□□□□□ -1.52
SOX6-208ENST00000527619 A0A0J9YXY3 114 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 BUB3O43684 328 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 COX7A1P24310 79 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
SOX6-208ENST00000527619 CIRBPQ14011 172 aaKnown RBP5.57□□□□□ -1.52
SOX6-208ENST00000527619 PRR9Q5T870 116 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 NUP37Q8NFH4 326 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 SMCR5Q8TEV8 140 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 RBM12B-AS1Q9P1G2 102 aa5.57□□□□□ -1.52
SOX6-208ENST00000527619 ACACBO00763 2458 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 192.4 ms