RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 GABARAPL1Q9H0R8 117 aa2.18□□□□□ -2.06
COPB1-205ENST00000526527 SND1-IT1Q9HBX3 110 aa2.18□□□□□ -2.06
COPB1-205ENST00000526527 PHLDA3Q9Y5J5 127 aa2.18□□□□□ -2.06
COPB1-205ENST00000526527 LRRK1Q38SD2 2015 aa2.18□□□□□ -2.06
COPB1-205ENST00000526527 GVINP1Q7Z2Y8 2422 aa2.18□□□□□ -2.06
COPB1-205ENST00000526527 KIF26AQ9ULI4 1882 aaPredicted RBP2.18□□□□□ -2.06
COPB1-205ENST00000526527 C5orf42Q9H799 3197 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 XIRP2A4UGR9 3374 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 SCN2AQ99250 2005 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 IGLV8-61A0A075B6I0 122 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 IGLV1-50A0A075B6I6 118 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 IGHV3-43A0A0B4J1X8 118 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 A0A0J9YXY3 114 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 MYMXA0A1B0GTQ4 84 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 A0A1W2PQD3 144 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 hDV103S1A0JD37 113 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 CEBPZOSA8MTT3 80 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 SLC25A20O43772 301 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 IGLV3-25P01717 112 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 IGKV1-16P04430 117 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 MSMBP08118 114 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 COX6CP09669 75 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 ZNF117Q03924 483 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 ATXN8Q156A1 80 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 Q6P435 159 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 DEFB119Q8N690 84 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 C14orf178Q8N769 122 aaPredicted RBP2.17□□□□□ -2.06
COPB1-205ENST00000526527 CYYR1Q96J86 154 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 CHCHD7Q9BUK0 85 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 FGF23Q9GZV9 251 aaPredicted RBP2.17□□□□□ -2.06
COPB1-205ENST00000526527 PRO1854Q9UHT4 67 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 TIMM9Q9Y5J7 89 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 HILPDAQ9Y5L2 63 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 DOCK4Q8N1I0 1966 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 MYO18AQ92614 2054 aaKnown RBP2.17□□□□□ -2.06
COPB1-205ENST00000526527 EP300Q09472 2414 aaPredicted RBP2.17□□□□□ -2.06
COPB1-205ENST00000526527 HELZP42694 1942 aaKnown RBP2.17□□□□□ -2.06
COPB1-205ENST00000526527 MYLKQ15746 1914 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 GREB1Q4ZG55 1949 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 ANAPC1Q9H1A4 1944 aa2.17□□□□□ -2.06
COPB1-205ENST00000526527 ZFHX2Q9C0A1 2572 aaPredicted RBP2.16□□□□□ -2.06
COPB1-205ENST00000526527 ATRXP46100 2492 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 SPTBN2O15020 2390 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 SCN8AQ9UQD0 1980 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 MUC22E2RYF6 1773 aaPredicted RBP2.16□□□□□ -2.06
COPB1-205ENST00000526527 SDK1Q7Z5N4 2213 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 IGKV1-12A0A0C4DH73 117 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 IGHV7-4-1A0A0J9YVY3 117 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 TRBV10-3A0A0K0K1G6 114 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 A6NED7 52 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 C17orf51A8MQB3 221 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 LEPROTL1O95214 131 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 IGKV1D-12P01611 117 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 KRTAP1-4P0C5Y4 121 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 IGHV3-30-3P0DP02 117 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 XCL1P47992 114 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 DEFB121Q5J5C9 76 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 CASC10Q5T4H9 136 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 PATE2Q6UY27 113 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 ZNF818PQ6ZRF7 136 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 C2orf91Q6ZV80 131 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 CNEP1R1Q8N9A8 125 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 SPTSSBQ8NFR3 76 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 CCL4L1Q8NHW4 92 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 RNASE6Q93091 150 aaKnown RBP2.16□□□□□ -2.06
COPB1-205ENST00000526527 TXNDC17Q9BRA2 123 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 KIF25-AS1Q9Y6Z4 181 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 MYO10Q9HD67 2058 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 PIEZO1Q92508 2521 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 NCOR2Q9Y618 2525 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 A0A0C4DFX4 3053 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 CEP250Q9BV73 2442 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 OTOGLQ3ZCN5 2332 aa2.16□□□□□ -2.06
COPB1-205ENST00000526527 KIAA1549LQ6ZVL6 1849 aa2.15□□□□□ -2.06
COPB1-205ENST00000526527 ATG2BQ96BY7 2078 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 MYOFQ9NZM1 2061 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 IGHV5-51A0A0C4DH38 117 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 IGHV3-66A0A0C4DH42 116 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 ZNF815PA8K554 130 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 SH2D1AO60880 128 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 CPSF4O95639 269 aaKnown RBP2.15□□□□□ -2.07
COPB1-205ENST00000526527 HMGN2P05204 90 aaKnown RBP2.15□□□□□ -2.07
COPB1-205ENST00000526527 CISD3P0C7P0 127 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 IFI27P40305 119 aaPredicted RBP2.15□□□□□ -2.07
COPB1-205ENST00000526527 EGFEM1PQ0D2K5 195 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 KLKP1Q107X0 134 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 PLGLAQ15195 96 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 ATP5EP2Q5VTU8 51 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 ZNF826PQ6ZT77 177 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 PFN4Q8NHR9 129 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 FAM104AQ969W3 186 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 RETNLBQ9BQ08 111 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 LIMD2Q9BT23 127 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 TTTY13Q9BZ97 58 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 ZNF355PQ9NSJ1 428 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 NDUFA12Q9UI09 145 aa2.15□□□□□ -2.07
COPB1-205ENST00000526527 RIF1Q5UIP0 2472 aaKnown RBP2.15□□□□□ -2.07
COPB1-205ENST00000526527 NUMA1Q14980 2115 aa2.14□□□□□ -2.07
COPB1-205ENST00000526527 TRAV7A0A075B6U4 112 aa2.14□□□□□ -2.07
COPB1-205ENST00000526527 IGHV3-73A0A0B4J1V6 119 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms