RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 FAM231AP0DMU4 169 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 FAM231CP0DMU5 169 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 ZNF56Q15929 161 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 TDRG1Q3Y452 100 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 CFAP126Q5VTH2 177 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 LGALS9CQ6DKI2 356 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 STPG4Q8N801 248 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 C15orf53Q8NAA6 179 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 OR2D3Q8NGH3 330 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 DEFB104AQ8WTQ1 72 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 C11orf52Q96A22 123 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 C9orf85Q96MD7 179 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 SPXQ9BT56 116 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 RNASE7Q9H1E1 156 aaKnown RBP3.54□□□□□ -1.84
SVIP-202ENST00000525670 PARLQ9H300 379 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 ZFP30Q9Y2G7 519 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 LINC00588Q9Y4M8 146 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 PHLDA3Q9Y5J5 127 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 DNAH11Q96DT5 4516 aa3.54□□□□□ -1.84
SVIP-202ENST00000525670 K7EN84 100 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 K7EQD1 137 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 PDE6DO43924 150 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 P01737 135 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 SRIP30626 198 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 CRYBA4P53673 196 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 ESRGQ1W209 222 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 NOTCH2NLQ7Z3S9 236 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 ARL6IP6Q8N6S5 226 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 C14orf178Q8N769 122 aaPredicted RBP3.53□□□□□ -1.84
SVIP-202ENST00000525670 SMIM7Q9BQ49 75 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 TCEAL7Q9BRU2 100 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 Q9UF83 564 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 HHLA3Q9XRX5 114 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 ICOSQ9Y6W8 199 aa3.53□□□□□ -1.84
SVIP-202ENST00000525670 IGHV3-38A0A0C4DH36 116 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 TRBV6-1A0A0K0K1D8 114 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 C9JQL5 133 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 RS1O15537 224 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 NXPH4O95158 308 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 GATA1P15976 413 aaPredicted RBP3.52□□□□□ -1.85
SVIP-202ENST00000525670 CCL18P55774 89 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 ADIRFQ15847 76 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 LGALS9BQ3B8N2 356 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 SPANXN1Q5VSR9 72 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 TEX261Q6UWH6 196 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 WFDC10BQ8IUB3 73 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 SLC25A29Q8N8R3 303 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 FER1L6-AS1Q8NA97 138 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 RASL10AQ92737 203 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 FAM210AQ96ND0 272 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 PRO0255Q9UI72 69 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 PKD1P98161 4303 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 BIRC6Q9NR09 4857 aa3.52□□□□□ -1.85
SVIP-202ENST00000525670 ZNF727A8MUV8 499 aa3.51□□□□□ -1.85
SVIP-202ENST00000525670 S100A9P06702 114 aaKnown RBP3.51□□□□□ -1.85
SVIP-202ENST00000525670 SRP19P09132 144 aaKnown RBP3.51□□□□□ -1.85
SVIP-202ENST00000525670 FUSP35637 526 aaKnown RBP eCLIP3.51□□□□□ -1.85
SVIP-202ENST00000525670 TCTAP57738 103 aa3.51□□□□□ -1.85
SVIP-202ENST00000525670 ZFP82Q8N141 532 aa3.51□□□□□ -1.85
SVIP-202ENST00000525670 ZNRF2Q8NHG8 242 aa3.51□□□□□ -1.85
SVIP-202ENST00000525670 OCC1Q8TAD7 63 aa3.51□□□□□ -1.85
SVIP-202ENST00000525670 FAM210BQ96KR6 192 aa3.51□□□□□ -1.85
SVIP-202ENST00000525670 RPP21Q9H633 154 aaKnown RBP3.51□□□□□ -1.85
SVIP-202ENST00000525670 IL36BQ9NZH7 164 aa3.51□□□□□ -1.85
SVIP-202ENST00000525670 DYNC1H1Q14204 4646 aaKnown RBP3.5□□□□□ -1.85
SVIP-202ENST00000525670 DNAH5Q8TE73 4624 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 TRAV26-2A0A0B4J265 109 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 NBDYA0A0U1RRE5 68 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 C19orf71A6NCJ1 209 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 A8MWV9 139 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 USP17L23D6RBM5 183 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 GATCO43716 136 aaKnown RBP3.5□□□□□ -1.85
SVIP-202ENST00000525670 IGHV3-30P01768 117 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 IGHV3-33P01772 117 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 IGHV3-30-3P0DP02 117 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 IGHV3-30-5P0DP03 117 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 FOXA3P55318 350 aaPredicted RBP3.5□□□□□ -1.85
SVIP-202ENST00000525670 RHOHQ15669 191 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 MRPL23Q16540 153 aaKnown RBP3.5□□□□□ -1.85
SVIP-202ENST00000525670 OR10J3Q5JRS4 329 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 LYZL1Q6UWQ5 148 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 NEGR1Q7Z3B1 354 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 PGLYRP4Q96LB8 373 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 AP1S3Q96PC3 154 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 TXNDC17Q9BRA2 123 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 PRADC1Q9BSG0 188 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 Q9HAA7 133 aa3.5□□□□□ -1.85
SVIP-202ENST00000525670 MRPS16Q9Y3D3 137 aaKnown RBP3.5□□□□□ -1.85
SVIP-202ENST00000525670 TMEM250H0YL14 139 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 RTL8CO15255 209 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 SNAI2O43623 268 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 CIDEAO60543 219 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 SMIM17P0DL12 118 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 TAGLN2P37802 199 aaKnown RBP3.49□□□□□ -1.85
SVIP-202ENST00000525670 IFITM2Q01629 132 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 UFSP1Q6NVU6 142 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 LYPD5Q6UWN5 251 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 COX8CQ7Z4L0 72 aa3.49□□□□□ -1.85
SVIP-202ENST00000525670 LINC01551Q86U37 167 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms