RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 SMIM12Q96EX1 92 aa12.32□□□□□ -0.44
CAPN1-203ENST00000525013 COX11Q9Y6N1 276 aa12.32□□□□□ -0.44
CAPN1-203ENST00000525013 IGKV2D-24A0A075B6R9 120 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 TRBV6-8A0A0A6YYG3 113 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 XKRY2A2RUG3 117 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 C19orf71A6NCJ1 209 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 EPM2AB3EWF7 344 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 ELOBQ15370 118 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 C9orf62Q8N4C0 152 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 DNAJC30Q96LL9 226 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 BIN3Q9NQY0 253 aa12.31□□□□□ -0.44
CAPN1-203ENST00000525013 TRBV20OR9-2A0A075B6H5 130 aa12.3□□□□□ -0.44
CAPN1-203ENST00000525013 MGPP08493 103 aa12.3□□□□□ -0.44
CAPN1-203ENST00000525013 IGLC6P0CF74 106 aa12.3□□□□□ -0.44
CAPN1-203ENST00000525013 TAGLN2P37802 199 aaKnown RBP12.3□□□□□ -0.44
CAPN1-203ENST00000525013 BAALCQ8WXS3 180 aa12.3□□□□□ -0.44
CAPN1-203ENST00000525013 CHCHD7Q9BUK0 85 aa12.3□□□□□ -0.44
CAPN1-203ENST00000525013 KIF25-AS1Q9Y6Z4 181 aa12.3□□□□□ -0.44
CAPN1-203ENST00000525013 CACNG7P62955 275 aa12.29□□□□□ -0.44
CAPN1-203ENST00000525013 CHCHD5Q9BSY4 110 aa12.29□□□□□ -0.44
CAPN1-203ENST00000525013 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-203ENST00000525013 F2Z2F3 143 aa12.27□□□□□ -0.45
CAPN1-203ENST00000525013 HAMPP81172 84 aa12.27□□□□□ -0.45
CAPN1-203ENST00000525013 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
CAPN1-203ENST00000525013 ALKAL2Q6UX46 152 aa12.27□□□□□ -0.45
CAPN1-203ENST00000525013 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.45
CAPN1-203ENST00000525013 SMR3BP02814 79 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-203ENST00000525013 Q0VG73 95 aa12.26□□□□□ -0.45
CAPN1-203ENST00000525013 TMEM97Q5BJF2 176 aa12.26□□□□□ -0.45
CAPN1-203ENST00000525013 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
CAPN1-203ENST00000525013 NUDT10Q8NFP7 164 aa12.26□□□□□ -0.45
CAPN1-203ENST00000525013 FRZBQ92765 325 aa12.26□□□□□ -0.45
CAPN1-203ENST00000525013 NUDT11Q96G61 164 aa12.26□□□□□ -0.45
CAPN1-203ENST00000525013 H7C1H1 209 aa12.25□□□□□ -0.45
CAPN1-203ENST00000525013 M0QY20 66 aa12.25□□□□□ -0.45
CAPN1-203ENST00000525013 PKIAP61925 76 aa12.25□□□□□ -0.45
CAPN1-203ENST00000525013 BLOC1S1P78537 153 aa12.25□□□□□ -0.45
CAPN1-203ENST00000525013 MPV17L2Q567V2 206 aa12.25□□□□□ -0.45
CAPN1-203ENST00000525013 CRPP02741 224 aa12.24□□□□□ -0.45
CAPN1-203ENST00000525013 ANGP03950 147 aaKnown RBP12.24□□□□□ -0.45
CAPN1-203ENST00000525013 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
CAPN1-203ENST00000525013 NTF3P20783 257 aa12.24□□□□□ -0.45
CAPN1-203ENST00000525013 Q5VSD8 79 aa12.24□□□□□ -0.45
CAPN1-203ENST00000525013 SUMO4Q6EEV6 95 aa12.24□□□□□ -0.45
CAPN1-203ENST00000525013 NTM-AS1Q6ZSK4 140 aa12.24□□□□□ -0.45
CAPN1-203ENST00000525013 OCC1Q8TAD7 63 aa12.24□□□□□ -0.45
CAPN1-203ENST00000525013 Q8N976 141 aa12.23□□□□□ -0.45
CAPN1-203ENST00000525013 C1orf43Q9BWL3 253 aa12.23□□□□□ -0.45
CAPN1-203ENST00000525013 RNASE7Q9H1E1 156 aaKnown RBP12.23□□□□□ -0.45
CAPN1-203ENST00000525013 RPP21Q9H633 154 aaKnown RBP12.23□□□□□ -0.45
CAPN1-203ENST00000525013 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
CAPN1-203ENST00000525013 K7EN84 100 aa12.22□□□□□ -0.45
CAPN1-203ENST00000525013 NKX2-5P52952 324 aaPredicted RBP12.22□□□□□ -0.45
CAPN1-203ENST00000525013 GAGE6Q13070 117 aa12.22□□□□□ -0.45
CAPN1-203ENST00000525013 ATRAIDQ6UW56 229 aa12.22□□□□□ -0.45
CAPN1-203ENST00000525013 ENHOQ6UWT2 76 aa12.22□□□□□ -0.45
CAPN1-203ENST00000525013 FAM30AQ9NZY2 134 aa12.22□□□□□ -0.45
CAPN1-203ENST00000525013 CTRLP40313 264 aa12.21□□□□□ -0.45
CAPN1-203ENST00000525013 CEBPGP53567 150 aa12.21□□□□□ -0.45
CAPN1-203ENST00000525013 TWIST1Q15672 202 aa12.21□□□□□ -0.45
CAPN1-203ENST00000525013 RASL11AQ6T310 242 aa12.21□□□□□ -0.45
CAPN1-203ENST00000525013 DPH3P1Q9H4G8 78 aa12.21□□□□□ -0.45
CAPN1-203ENST00000525013 FAT1Q14517 4588 aa12.21□□□□□ -0.46
CAPN1-203ENST00000525013 SRRM2Q9UQ35 2752 aaKnown RBP12.2□□□□□ -0.46
CAPN1-203ENST00000525013 IGHV1-24A0A0C4DH33 117 aa12.2□□□□□ -0.46
CAPN1-203ENST00000525013 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
CAPN1-203ENST00000525013 RBX1P62877 108 aa12.2□□□□□ -0.46
CAPN1-203ENST00000525013 WDR73Q6P4I2 378 aa12.2□□□□□ -0.46
CAPN1-203ENST00000525013 FAM229AH3BQW9 127 aa12.19□□□□□ -0.46
CAPN1-203ENST00000525013 INAFM2P0DMQ5 153 aa12.19□□□□□ -0.46
CAPN1-203ENST00000525013 LINC01620Q4KN68 170 aa12.19□□□□□ -0.46
CAPN1-203ENST00000525013 MIAQ16674 131 aa12.18□□□□□ -0.46
CAPN1-203ENST00000525013 IQCJQ1A5X6 159 aa12.18□□□□□ -0.46
CAPN1-203ENST00000525013 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
CAPN1-203ENST00000525013 NIT2Q9NQR4 276 aa12.18□□□□□ -0.46
CAPN1-203ENST00000525013 GATCO43716 136 aaKnown RBP12.17□□□□□ -0.46
CAPN1-203ENST00000525013 HLA-DQA1P01909 254 aa12.17□□□□□ -0.46
CAPN1-203ENST00000525013 LINC00269Q8N2A0 174 aa12.17□□□□□ -0.46
CAPN1-203ENST00000525013 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
CAPN1-203ENST00000525013 DEFB104AQ8WTQ1 72 aa12.17□□□□□ -0.46
CAPN1-203ENST00000525013 CNFNQ9BYD5 112 aa12.17□□□□□ -0.46
CAPN1-203ENST00000525013 C14orf177Q52M58 125 aa12.16□□□□□ -0.46
CAPN1-203ENST00000525013 TMEM243Q9BU79 118 aa12.16□□□□□ -0.46
CAPN1-203ENST00000525013 EIF5A2Q9GZV4 153 aaKnown RBP12.16□□□□□ -0.46
CAPN1-203ENST00000525013 FLG2Q5D862 2391 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-203ENST00000525013 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
CAPN1-203ENST00000525013 GTSF1Q8WW33 167 aa12.15□□□□□ -0.46
CAPN1-203ENST00000525013 PRR34Q9NV39 138 aa12.14□□□□□ -0.47
CAPN1-203ENST00000525013 DNAH8Q96JB1 4490 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 VPS13BQ7Z7G8 4022 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 TRAV26-2A0A0B4J265 109 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 A0A1B0GVG6 124 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 A8MWL6 223 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 USP17L23D6RBM5 183 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 Q6ZSA8 131 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 FAM231DQ6ZW35 169 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 PGLYRP4Q96LB8 373 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 SMIM7Q9BQ49 75 aa12.13□□□□□ -0.47
CAPN1-203ENST00000525013 UBE2L6O14933 153 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms