RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GPX8Q8TED1 209 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 UBE2WQ96B02 151 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 SCGB3A2Q96PL1 93 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 TCEAL7Q9BRU2 100 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 PBDC1Q9BVG4 233 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 KRTAP2-4Q9BYR9 128 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 FXYD6Q9H0Q3 95 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 ARV1Q9H2C2 271 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 PPDPFQ9H3Y8 114 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 C11orf1Q9H5F2 150 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 NAA60Q9H7X0 242 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 NPVFQ9HCQ7 196 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 KCNIP2Q9NS61 270 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 MRPL16Q9NX20 251 aaKnown RBP0.79□□□□□ -2.28
CD44-212ENST00000524922 RHBDL2Q9NX52 303 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 IL36BQ9NZH7 164 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 OR5AC2Q9NZP5 309 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 TP73-AS1Q9UF72 201 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 POMPQ9Y244 141 aa0.79□□□□□ -2.28
CD44-212ENST00000524922 TRBV25-1A0A075B6N4 114 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 TRAV12-3A0A0B4J271 114 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IGHV1-58A0A0C4DH39 117 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 LOC107984640A0A0U1RRK4 108 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 CEBPZOSA8MTT3 80 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 M0R129 80 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 LECT2O14960 151 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 EIF3GO75821 320 aaKnown RBP eCLIP0.78□□□□□ -2.28
CD44-212ENST00000524922 CIB2O75838 187 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 CCNKO75909 580 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 TNFAIP8O95379 198 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 APOMO95445 188 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 NCR2O95944 276 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IGHV3-30P01768 117 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IGHV3-33P01772 117 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IL5P05113 134 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 LINC00869P0C866 280 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IGHV3-30-3P0DP02 117 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IGHV3-30-5P0DP03 117 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 ANXA3P12429 323 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 HTN1P15515 57 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 POLR2IP36954 125 aaKnown RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 RPL28P46779 137 aaKnown RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 RPL29P47914 159 aaKnown RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 DEFB1P60022 68 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 S100A10P60903 97 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 COX6A2Q02221 97 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IAH1Q2TAA2 248 aaPredicted RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 TRIM16LQ309B1 348 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 MAJINQ3KP22 176 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 HSP90B2PQ58FF3 399 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 TMEM14EPQ6UXP3 125 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 LINC00305Q7Z4B0 112 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 LINC00518Q8N0U6 118 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 ZFP82Q8N141 532 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 DHRSXQ8N5I4 330 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 RNF182Q8N6D2 247 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 DAND5Q8N907 189 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 C15orf56Q8N910 161 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 LINC00304Q8N9R0 145 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 OR5C1Q8NGR4 320 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 LRRC20Q8TCA0 184 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 GLYATL2Q8WU03 294 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 ACY3Q96HD9 319 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 DNAJC30Q96LL9 226 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 IMMP2LQ96T52 175 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 GNB1LQ9BYB4 327 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 PARD6GQ9BYG4 376 aaPredicted RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 SLIRPQ9GZT3 109 aaKnown RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 NAA50Q9GZZ1 169 aaKnown RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 AGPAT4-IT1Q9H0P7 198 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 DUSP21Q9H596 190 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 SLC25A22Q9H936 323 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 MRPL35Q9NZE8 188 aaKnown RBP0.78□□□□□ -2.28
CD44-212ENST00000524922 COPZ2Q9P299 210 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 COMMD3Q9UBI1 195 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 KCNIP3Q9Y2W7 256 aa0.78□□□□□ -2.28
CD44-212ENST00000524922 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.29
CD44-212ENST00000524922 IGLV4-69A0A075B6H9 119 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 A0A096LNI7 61 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 IGHV1-24A0A0C4DH33 117 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 LINC00854A0A1B0GVQ3 168 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 C19orf71A6NCJ1 209 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 C5orf51A6NDU8 294 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 G3V3Q6 166 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 H3BMQ9 156 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 IGHV3-48P01763 117 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 HLA-DQA1P01909 254 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 APOA1P02647 267 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 ANGP03950 147 aaKnown RBP0.77□□□□□ -2.29
CD44-212ENST00000524922 PRM2P04554 102 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 TYMSP04818 313 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 PRSS3P35030 304 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 FXYD4P59646 89 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 GABARAPL2P60520 117 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 RAB4BP61018 213 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 HERVK_113P61574 105 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 RBX1P62877 108 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 AKR1C1Q04828 323 aa0.77□□□□□ -2.29
CD44-212ENST00000524922 MXD1Q05195 221 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms