RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 DUX5Q96PT3 197 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 SPATA25Q9BR10 227 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 C1QTNF4Q9BXJ3 329 aa6.56□□□□□ -1.36
PKP3-202ENST00000524646 TSSC4Q9Y5U2 329 aaPredicted RBP6.56□□□□□ -1.36
PKP3-202ENST00000524646 CHD8Q9HCK8 2581 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 RBMY1BA6NDE4 496 aaKnown RBP6.55□□□□□ -1.36
PKP3-202ENST00000524646 RBMY1EA6NEQ0 496 aaKnown RBP6.55□□□□□ -1.36
PKP3-202ENST00000524646 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 RHODO00212 210 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 TGFAP01135 160 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 RBMY1DP0C7P1 496 aaKnown RBP6.55□□□□□ -1.36
PKP3-202ENST00000524646 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 CD28P10747 220 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 CRYBA4P53673 196 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 ETDBQ3ZM63 59 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 TCTEX1D4Q5JR98 221 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 MTURNQ8N3F0 131 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 PTH2Q96A98 100 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 SPAG8Q99932 426 aaPredicted RBP6.55□□□□□ -1.36
PKP3-202ENST00000524646 PYGO1Q9Y3Y4 419 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 CSPG4Q6UVK1 2322 aa6.55□□□□□ -1.36
PKP3-202ENST00000524646 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 A8MWV9 139 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 TMEM238C9JI98 176 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 M0R2P5 195 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 SLURP1P55000 103 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 DEFB131AP59861 70 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 SH2D6Q7Z4S9 175 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 Q8N2B8 174 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 C10orf126Q8N4M7 172 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 DUX3Q96PT4 197 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 OPRPNQ99935 248 aaPredicted RBP6.54□□□□□ -1.36
PKP3-202ENST00000524646 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
PKP3-202ENST00000524646 TRBV20-1A0A075B6N2 111 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 A0A0J9YXV3 536 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 H3BMM0 161 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 CFC1BP0CG36 223 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 CFC1P0CG37 223 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 PSMB2P49721 201 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 SMCPP49901 116 aaPredicted RBP6.53□□□□□ -1.36
PKP3-202ENST00000524646 C4orf3Q8WVX3 66 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 VCX2Q9H322 139 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 MAP6D1Q9H9H5 199 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 SPANXA1Q9NS26 97 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 PRO1854Q9UHT4 67 aa6.53□□□□□ -1.36
PKP3-202ENST00000524646 GAGE12HA6NDE8 117 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 INSP01308 110 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 MRPS36P82909 103 aaKnown RBP6.52□□□□□ -1.37
PKP3-202ENST00000524646 DEFB136Q30KP8 78 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 TMEM61Q8N0U2 210 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 DYNLRB2Q8TF09 96 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 RAX2Q96IS3 184 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 SIGMAR1Q99720 223 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 TIMM21Q9BVV7 248 aa6.52□□□□□ -1.37
PKP3-202ENST00000524646 ANKRD17O75179 2603 aaKnown RBP6.52□□□□□ -1.37
PKP3-202ENST00000524646 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.51□□□□□ -1.37
PKP3-202ENST00000524646 A0A0J9YXY3 114 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 A4D1N5 150 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 TCL1BO95988 128 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 C18orf65Q6ZTR6 163 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 SBSPONQ8IVN8 264 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 MAPK1IP1LQ8NDC0 245 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 TMEM263Q8WUH6 116 aaKnown RBP6.51□□□□□ -1.37
PKP3-202ENST00000524646 PPDPFLQ8WWR9 84 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 DNAJC30Q96LL9 226 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 BEX4Q9NWD9 120 aaPredicted RBP6.51□□□□□ -1.37
PKP3-202ENST00000524646 TNFRSF18Q9Y5U5 241 aa6.51□□□□□ -1.37
PKP3-202ENST00000524646 CACNA1AO00555 2505 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 ITPR1Q14643 2758 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 IGHV3-64A0A075B6Q5 118 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 IGHV3-73A0A0B4J1V6 119 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 M0QXV9 152 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 EIF4EBP3O60516 100 aaPredicted RBP6.5□□□□□ -1.37
PKP3-202ENST00000524646 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 AZU1P20160 251 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 FOXI1Q12951 378 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 SFTA2Q6UW10 78 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 TEN1Q86WV5 123 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 C11orf72Q8NBR9 251 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 ZNF418Q8TF45 676 aaPredicted RBP6.5□□□□□ -1.37
PKP3-202ENST00000524646 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 SPXQ9BT56 116 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 CHCHD7Q9BUK0 85 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 GTSF1LQ9H1H1 148 aa6.5□□□□□ -1.37
PKP3-202ENST00000524646 RELNP78509 3460 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 IGHV1-58A0A0C4DH39 117 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 RS1O15537 224 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 IGHV3-53P01767 116 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 INSL3P51460 131 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 PROK1P58294 105 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 BEAN1Q3B7T3 259 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 KHDC1LQ5JSQ8 128 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 Q6ZUT4 128 aa6.49□□□□□ -1.37
PKP3-202ENST00000524646 LRRC75A-AS1Q8N1F1 130 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms