RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 FAM210AQ96ND0 272 aa6.35□□□□□ -1.39
PABPC1-222ENST00000523555 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
PABPC1-222ENST00000523555 RPP21Q9H633 154 aaKnown RBP6.35□□□□□ -1.39
PABPC1-222ENST00000523555 C9JQL5 133 aa6.34□□□□□ -1.39
PABPC1-222ENST00000523555 SRP19P09132 144 aaKnown RBP6.34□□□□□ -1.39
PABPC1-222ENST00000523555 NTF3P20783 257 aa6.34□□□□□ -1.39
PABPC1-222ENST00000523555 CTRLP40313 264 aa6.34□□□□□ -1.39
PABPC1-222ENST00000523555 SRSF3P84103 164 aaKnown RBP6.34□□□□□ -1.39
PABPC1-222ENST00000523555 NTM-AS1Q6ZSK4 140 aa6.34□□□□□ -1.39
PABPC1-222ENST00000523555 EIF5A2Q9GZV4 153 aaKnown RBP6.34□□□□□ -1.39
PABPC1-222ENST00000523555 A0A087WWC5 75 aa6.33□□□□□ -1.4
PABPC1-222ENST00000523555 M0QY20 66 aa6.33□□□□□ -1.4
PABPC1-222ENST00000523555 SMIM17P0DL12 118 aa6.33□□□□□ -1.4
PABPC1-222ENST00000523555 FOXA3P55318 350 aaPredicted RBP6.33□□□□□ -1.4
PABPC1-222ENST00000523555 CACNG7P62955 275 aa6.33□□□□□ -1.4
PABPC1-222ENST00000523555 MAPKAPK5-AS1Q8N8E1 139 aa6.33□□□□□ -1.4
PABPC1-222ENST00000523555 DEFB104AQ8WTQ1 72 aa6.33□□□□□ -1.4
PABPC1-222ENST00000523555 BIN3Q9NQY0 253 aa6.33□□□□□ -1.4
PABPC1-222ENST00000523555 TRBV6-8A0A0A6YYG3 113 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 XKRY2A2RUG3 117 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 F2Z2F3 143 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 PSCAO43653 123 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 GATCO43716 136 aaKnown RBP6.32□□□□□ -1.4
PABPC1-222ENST00000523555 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 LAGE3Q14657 143 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 MPV17L2Q567V2 206 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 TEX261Q6UWH6 196 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 LINC01551Q86U37 167 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 SMIM7Q9BQ49 75 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 KLK12Q9UKR0 248 aa6.32□□□□□ -1.4
PABPC1-222ENST00000523555 TRAV26-2A0A0B4J265 109 aa6.31□□□□□ -1.4
PABPC1-222ENST00000523555 LECT2O14960 151 aa6.31□□□□□ -1.4
PABPC1-222ENST00000523555 CDK2AP2O75956 126 aa6.31□□□□□ -1.4
PABPC1-222ENST00000523555 TWIST1Q15672 202 aa6.31□□□□□ -1.4
PABPC1-222ENST00000523555 FAM231DQ6ZW35 169 aa6.31□□□□□ -1.4
PABPC1-222ENST00000523555 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
PABPC1-222ENST00000523555 DPH3P1Q9H4G8 78 aa6.31□□□□□ -1.4
PABPC1-222ENST00000523555 VPS13BQ7Z7G8 4022 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 ZNF727A8MUV8 499 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 EREGO14944 169 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 TRGC1P0CF51 173 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 Q8N814 137 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 Q8N976 141 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 GATD1Q8NB37 220 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 PGPEP1Q9NXJ5 209 aa6.3□□□□□ -1.4
PABPC1-222ENST00000523555 A0A087WX48 190 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 TMEM262E9PQX1 116 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 NDUFS6O75380 124 aaKnown RBP6.29□□□□□ -1.4
PABPC1-222ENST00000523555 GAS8-AS1O95177 125 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 XGP55808 180 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 HAMPP81172 84 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 GAGE6Q13070 117 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 WDR73Q6P4I2 378 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 RASL11AQ6T310 242 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 ATRAIDQ6UW56 229 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 ENHOQ6UWT2 76 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 UBE2WQ96B02 151 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
PABPC1-222ENST00000523555 URGCP-MRPS24S4R325 110 aa6.29□□□□□ -1.4
PABPC1-222ENST00000523555 IGKV2D-24A0A075B6R9 120 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 TRAV8-3A0A0A6YYJ7 113 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
PABPC1-222ENST00000523555 CT83Q5H943 113 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 CDPF1Q6NVV7 123 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 CLPSL2Q6UWE3 100 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 C15orf54Q8N8G6 183 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 BAALCQ8WXS3 180 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 ISOC2Q96AB3 205 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 CHCHD5Q9BSY4 110 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 NIT2Q9NQR4 276 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 V9GYV3 84 aa6.28□□□□□ -1.4
PABPC1-222ENST00000523555 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-222ENST00000523555 TRBV25-1A0A075B6N4 114 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 IGLV5-52A0A0A0MRZ9 124 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 HIGD1CA8MV81 97 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 A8MWL6 223 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 H7C1H1 209 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 ANGP03950 147 aaKnown RBP6.27□□□□□ -1.41
PABPC1-222ENST00000523555 RBX1P62877 108 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 IQCJQ1A5X6 159 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 TSKUQ8WUA8 353 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 TM2D2Q9BX73 214 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 GFRA4Q9GZZ7 299 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 OSTCQ9NRP0 149 aa6.27□□□□□ -1.41
PABPC1-222ENST00000523555 IGLV4-60A0A075B6I1 120 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 IGHV1-24A0A0C4DH33 117 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 GCSHP23434 173 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 ADIRFQ15847 76 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 LINC01620Q4KN68 170 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 C20orf203Q8NBC4 194 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 RNF185Q96GF1 192 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 FAM30AQ9NZY2 134 aa6.26□□□□□ -1.41
PABPC1-222ENST00000523555 TMEM241Q24JQ0 296 aa6.25□□□□□ -1.41
PABPC1-222ENST00000523555 TMEM97Q5BJF2 176 aa6.25□□□□□ -1.41
PABPC1-222ENST00000523555 KRTAP26-1Q6PEX3 210 aa6.25□□□□□ -1.41
PABPC1-222ENST00000523555 KCNIP4Q6PIL6 250 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms