RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 KRTAP26-1Q6PEX3 210 aa16.55■□□□□ 0.24
PVT1-219ENST00000523427 INO80EQ8NBZ0 244 aaPredicted RBP16.55■□□□□ 0.24
PVT1-219ENST00000523427 DERL1Q9BUN8 251 aa16.55■□□□□ 0.24
PVT1-219ENST00000523427 ZNF471Q9BX82 626 aaPredicted RBP16.55■□□□□ 0.24
PVT1-219ENST00000523427 hDV102S1A0JD36 115 aa16.54■□□□□ 0.24
PVT1-219ENST00000523427 LTAP01374 205 aa16.54■□□□□ 0.24
PVT1-219ENST00000523427 AKR1C3P42330 323 aa16.54■□□□□ 0.24
PVT1-219ENST00000523427 PRR34Q9NV39 138 aa16.54■□□□□ 0.24
PVT1-219ENST00000523427 MAP1LC3B2A6NCE7 125 aa16.53■□□□□ 0.24
PVT1-219ENST00000523427 CHTF8P0CG12 524 aa16.53■□□□□ 0.24
PVT1-219ENST00000523427 MAP1LC3BQ9GZQ8 125 aa16.53■□□□□ 0.24
PVT1-219ENST00000523427 MED28Q9H204 178 aa16.53■□□□□ 0.24
PVT1-219ENST00000523427 SPANXN1Q5VSR9 72 aa16.52■□□□□ 0.24
PVT1-219ENST00000523427 RAB5CP51148 216 aa16.51■□□□□ 0.23
PVT1-219ENST00000523427 CLRN3Q8NCR9 226 aa16.51■□□□□ 0.23
PVT1-219ENST00000523427 STOML3Q8TAV4 291 aa16.51■□□□□ 0.23
PVT1-219ENST00000523427 DPH3P1Q9H4G8 78 aa16.51■□□□□ 0.23
PVT1-219ENST00000523427 TRBV25-1A0A075B6N4 114 aa16.5■□□□□ 0.23
PVT1-219ENST00000523427 FXYD6-FXYD2A0A087WZ82 144 aa16.5■□□□□ 0.23
PVT1-219ENST00000523427 TRBV6-1A0A0K0K1D8 114 aa16.5■□□□□ 0.23
PVT1-219ENST00000523427 TMEM97Q5BJF2 176 aa16.5■□□□□ 0.23
PVT1-219ENST00000523427 A0A087WYN8 130 aa16.49■□□□□ 0.23
PVT1-219ENST00000523427 REG3AQ06141 175 aa16.49■□□□□ 0.23
PVT1-219ENST00000523427 AP5S1Q9NUS5 200 aa16.48■□□□□ 0.23
PVT1-219ENST00000523427 IGHV3-64A0A075B6Q5 118 aa16.47■□□□□ 0.23
PVT1-219ENST00000523427 SMIM17P0DL12 118 aa16.47■□□□□ 0.23
PVT1-219ENST00000523427 VAX2Q9UIW0 290 aa16.47■□□□□ 0.23
PVT1-219ENST00000523427 CNBPP62633 177 aaKnown RBP16.46■□□□□ 0.23
PVT1-219ENST00000523427 IGHV1-24A0A0C4DH33 117 aa16.45■□□□□ 0.22
PVT1-219ENST00000523427 PAGE4O60829 102 aa16.45■□□□□ 0.22
PVT1-219ENST00000523427 CIRBPQ14011 172 aaKnown RBP16.45■□□□□ 0.22
PVT1-219ENST00000523427 LRP2P98164 4655 aa16.45■□□□□ 0.22
PVT1-219ENST00000523427 SNAI2O43623 268 aa16.44■□□□□ 0.22
PVT1-219ENST00000523427 SLPIP03973 132 aa16.44■□□□□ 0.22
PVT1-219ENST00000523427 MGPP08493 103 aa16.44■□□□□ 0.22
PVT1-219ENST00000523427 FHITP49789 147 aa16.44■□□□□ 0.22
PVT1-219ENST00000523427 RNF213Q63HN8 5207 aa16.44■□□□□ 0.22
PVT1-219ENST00000523427 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.43■□□□□ 0.22
PVT1-219ENST00000523427 PHOX2AO14813 284 aa16.43■□□□□ 0.22
PVT1-219ENST00000523427 ODF1Q14990 250 aa16.43■□□□□ 0.22
PVT1-219ENST00000523427 IQCJQ1A5X6 159 aa16.43■□□□□ 0.22
PVT1-219ENST00000523427 C20orf203Q8NBC4 194 aa16.43■□□□□ 0.22
PVT1-219ENST00000523427 TCEAL7Q9BRU2 100 aa16.43■□□□□ 0.22
PVT1-219ENST00000523427 SSBP4Q9BWG4 385 aaPredicted RBP16.43■□□□□ 0.22
PVT1-219ENST00000523427 A0A1B0GV50 99 aa16.42■□□□□ 0.22
PVT1-219ENST00000523427 GIPP09681 153 aaPredicted RBP16.42■□□□□ 0.22
PVT1-219ENST00000523427 BAGE2Q86Y30 109 aa16.42■□□□□ 0.22
PVT1-219ENST00000523427 KIF25-AS1Q9Y6Z4 181 aa16.42■□□□□ 0.22
PVT1-219ENST00000523427 IGLV4-60A0A075B6I1 120 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 SCO2A0A1W2PP80 73 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 CXCL1P09341 107 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 OR5AL1P0C617 328 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 SPACA4Q8TDM5 124 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 RNF185Q96GF1 192 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 AP1S3Q96PC3 154 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 GFRA4Q9GZZ7 299 aa16.41■□□□□ 0.22
PVT1-219ENST00000523427 TRAV8-4A0A0B4J246 113 aa16.4■□□□□ 0.22
PVT1-219ENST00000523427 P01737 135 aa16.4■□□□□ 0.22
PVT1-219ENST00000523427 TPPP3Q9BW30 176 aa16.4■□□□□ 0.22
PVT1-219ENST00000523427 C7orf33Q8WU49 177 aa16.39■□□□□ 0.21
PVT1-219ENST00000523427 GTSF1Q8WW33 167 aa16.39■□□□□ 0.21
PVT1-219ENST00000523427 S100A9P06702 114 aaKnown RBP16.38■□□□□ 0.21
PVT1-219ENST00000523427 NKX2-5P52952 324 aaPredicted RBP16.38■□□□□ 0.21
PVT1-219ENST00000523427 TMEM243Q9BU79 118 aa16.38■□□□□ 0.21
PVT1-219ENST00000523427 M0QY20 66 aa16.37■□□□□ 0.21
PVT1-219ENST00000523427 MLST8Q9BVC4 326 aa16.37■□□□□ 0.21
PVT1-219ENST00000523427 TNXBP22105 4242 aa16.37■□□□□ 0.21
PVT1-219ENST00000523427 GZMBP10144 247 aa16.36■□□□□ 0.21
PVT1-219ENST00000523427 COX6A2Q02221 97 aa16.36■□□□□ 0.21
PVT1-219ENST00000523427 SUMO4Q6EEV6 95 aa16.36■□□□□ 0.21
PVT1-219ENST00000523427 SFT2D1Q8WV19 159 aa16.36■□□□□ 0.21
PVT1-219ENST00000523427 PLAC8Q9NZF1 115 aa16.36■□□□□ 0.21
PVT1-219ENST00000523427 IGKV2-24A0A0C4DH68 120 aa16.35■□□□□ 0.21
PVT1-219ENST00000523427 SULT1A2P50226 295 aa16.35■□□□□ 0.21
PVT1-219ENST00000523427 CYTL1Q9NRR1 136 aa16.35■□□□□ 0.21
PVT1-219ENST00000523427 IGKV3OR2-268A0A0C4DH90 116 aa16.34■□□□□ 0.21
PVT1-219ENST00000523427 H7C1H1 209 aa16.34■□□□□ 0.21
PVT1-219ENST00000523427 ARPC5O15511 151 aa16.34■□□□□ 0.21
PVT1-219ENST00000523427 PFDN1O60925 122 aa16.34■□□□□ 0.21
PVT1-219ENST00000523427 MAJINQ3KP22 176 aa16.34■□□□□ 0.21
PVT1-219ENST00000523427 LYPD6BQ8NI32 183 aa16.34■□□□□ 0.21
PVT1-219ENST00000523427 WDR73Q6P4I2 378 aa16.33■□□□□ 0.2
PVT1-219ENST00000523427 FAM213BQ8TBF2 198 aa16.33■□□□□ 0.2
PVT1-219ENST00000523427 A0A1B0GUV1 79 aa16.32■□□□□ 0.2
PVT1-219ENST00000523427 GAGE12HA6NDE8 117 aa16.32■□□□□ 0.2
PVT1-219ENST00000523427 UBE2L6O14933 153 aa16.32■□□□□ 0.2
PVT1-219ENST00000523427 HIGD2BQ4VC39 106 aa16.32■□□□□ 0.2
PVT1-219ENST00000523427 TMUB2Q71RG4 321 aa16.31■□□□□ 0.2
PVT1-219ENST00000523427 PRSS3P2Q8NHM4 247 aa16.31■□□□□ 0.2
PVT1-219ENST00000523427 LINC01600Q96MT4 127 aa16.31■□□□□ 0.2
PVT1-219ENST00000523427 C15orf56Q8N910 161 aa16.3■□□□□ 0.2
PVT1-219ENST00000523427 RPS10P46783 165 aaKnown RBP16.29■□□□□ 0.2
PVT1-219ENST00000523427 RASL11AQ6T310 242 aa16.29■□□□□ 0.2
PVT1-219ENST00000523427 FER1L6-AS1Q8NA97 138 aa16.29■□□□□ 0.2
PVT1-219ENST00000523427 AMTP48728 403 aa16.28■□□□□ 0.2
PVT1-219ENST00000523427 PRR3P79522 188 aaKnown RBP16.28■□□□□ 0.2
PVT1-219ENST00000523427 CFAP161Q6P656 301 aa16.28■□□□□ 0.2
PVT1-219ENST00000523427 STPG4Q8N801 248 aa16.28■□□□□ 0.2
PVT1-219ENST00000523427 RPL35P42766 123 aaKnown RBP16.27■□□□□ 0.2
PVT1-219ENST00000523427 KCNRGQ8N5I3 272 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms