RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 TREM1Q9NP99 234 aa2.48□□□□□ -2.01
NPM1-210ENST00000523339 ZNF492Q9P255 531 aa2.48□□□□□ -2.01
NPM1-210ENST00000523339 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
NPM1-210ENST00000523339 TP53TG3Q9ULZ0 132 aa2.48□□□□□ -2.01
NPM1-210ENST00000523339 V9GYV3 84 aa2.48□□□□□ -2.01
NPM1-210ENST00000523339 TRAV8-3A0A0A6YYJ7 113 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 TRAV12-3A0A0B4J271 114 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 RBAKDNA6NC62 111 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 IBA57-AS1B1ANH7 110 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 K7EQD1 137 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 PHOX2AO14813 284 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 SH2D1AO60880 128 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 CEBPGP53567 150 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 CRYBA4P53673 196 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 RAB14P61106 215 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 FLI1Q01543 452 aaPredicted RBP2.47□□□□□ -2.01
NPM1-210ENST00000523339 PEA15Q15121 130 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 ZNF674Q2M3X9 581 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 PRNTQ86SH4 94 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 CBLN2Q8IUK8 224 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 C7orf33Q8WU49 177 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 GTSF1Q8WW33 167 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 C20orf144Q9BQM9 153 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 SLC50A1Q9BRV3 221 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 SEC11CQ9BY50 192 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 EIF5A2Q9GZV4 153 aaKnown RBP2.47□□□□□ -2.01
NPM1-210ENST00000523339 GSN-AS1Q9NRJ2 163 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 URGCP-MRPS24S4R325 110 aa2.47□□□□□ -2.01
NPM1-210ENST00000523339 IGKV2D-24A0A075B6R9 120 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 TRAV26-2A0A0B4J265 109 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 C7orf77A4D0Y5 90 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 PDE6DO43924 150 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 PFN1P07737 140 aaKnown RBP2.46□□□□□ -2.02
NPM1-210ENST00000523339 CXCL1P09341 107 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 ZNF138P52744 262 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 FOXA3P55318 350 aaPredicted RBP2.46□□□□□ -2.02
NPM1-210ENST00000523339 DAZ2Q13117 558 aaKnown RBP2.46□□□□□ -2.02
NPM1-210ENST00000523339 WFDC2Q14508 124 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 PRR4Q16378 134 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 C14orf177Q52M58 125 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 LINC01556Q5JQF7 62 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 Q6AWC8 147 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 KCNIP4Q6PIL6 250 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 SH2D6Q7Z4S9 175 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 BAGE2Q86Y30 109 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 ARL6IP6Q8N6S5 226 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 LINC00612Q8N6U2 182 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 C11orf72Q8NBR9 251 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 HIST1H2BAQ96A08 127 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 FMC1Q96HJ9 113 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 LINC01600Q96MT4 127 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 SMIM7Q9BQ49 75 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 PYGO2Q9BRQ0 406 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 SMDT1Q9H4I9 107 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 MRPL16Q9NX20 251 aaKnown RBP2.46□□□□□ -2.02
NPM1-210ENST00000523339 NAT8Q9UHE5 227 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 PRELID1Q9Y255 219 aa2.46□□□□□ -2.02
NPM1-210ENST00000523339 MUC21A0A0G2JKD1 596 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 A0A0J9YXV3 536 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 MUC21A0A140T8X8 626 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 A0A1B0GXF2 115 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 GRIFINA4D1Z8 144 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 COLCA2A8K830 154 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 KRBOX1C9JBD0 128 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 F8W036 122 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 M0R036 132 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 GNRH2O43555 120 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 IFNA1P01562 189 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 APOC3P02656 99 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 TYMSP04818 313 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 IGLC6P0CF74 106 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 RNASE3P12724 160 aaKnown RBP2.45□□□□□ -2.02
NPM1-210ENST00000523339 TAGLN2P37802 199 aaKnown RBP2.45□□□□□ -2.02
NPM1-210ENST00000523339 LEPP41159 167 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 GNG4P50150 75 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 LAGE3Q14657 143 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 ADIRFQ15847 76 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 NDUFA5Q16718 116 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 TMEM241Q24JQ0 296 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 ANXA2RQ3ZCQ2 193 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 MUC21Q5SSG8 566 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 WDR73Q6P4I2 378 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 FAM231DQ6ZW35 169 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 S100A7AQ86SG5 101 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 ODF3Q96PU9 254 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 TCEAL7Q9BRU2 100 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 JPT2Q9H910 190 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 Q9UF83 564 aa2.45□□□□□ -2.02
NPM1-210ENST00000523339 TMSB15BA0A087X1C1 80 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 TGIF2-C20orf24A0A0A6YYL0 155 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 IGHV3-16A0A0C4DH30 117 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 TRBV7-9A0A0J9YWB2 115 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 SERTM2A0A1B0GWG4 89 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 SMIM27A0A1W2PRY6 76 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 C7orf71A4D174 169 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 MGST1P10620 155 aaKnown RBP2.44□□□□□ -2.02
NPM1-210ENST00000523339 RNASE4P34096 147 aaKnown RBP2.44□□□□□ -2.02
NPM1-210ENST00000523339 CTRLP40313 264 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 TCL1AP56279 114 aa2.44□□□□□ -2.02
NPM1-210ENST00000523339 PRR27Q6MZM9 219 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms