RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 Q6ZR54 194 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 NUP35Q8NFH5 326 aa8.11□□□□□ -1.11
HPS4-218ENST00000519774 TRBV7-3A0A075B6L6 115 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 TRAV8-6A0A0B4J262 113 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 TMEM218A2RU14 115 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 LINC00862A6NCI5 91 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 H7C1H1 209 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 UBE2D3P61077 147 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 UBE2D2P62837 147 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 PNRC1Q12796 327 aaPredicted RBP8.1□□□□□ -1.11
HPS4-218ENST00000519774 TTC32Q5I0X7 151 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 LELP1Q5T871 98 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 KRTAP1-5Q9BYS1 174 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 MRPL18Q9H0U6 180 aaKnown RBP8.1□□□□□ -1.11
HPS4-218ENST00000519774 NAT8BQ9UHF3 227 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 HYDINQ4G0P3 5121 aa8.1□□□□□ -1.11
HPS4-218ENST00000519774 IGHV3-38A0A0C4DH36 116 aa8.09□□□□□ -1.11
HPS4-218ENST00000519774 SMIM27A0A1W2PRY6 76 aa8.09□□□□□ -1.11
HPS4-218ENST00000519774 M0QY20 66 aa8.09□□□□□ -1.11
HPS4-218ENST00000519774 PPP1R2P9O14990 202 aa8.09□□□□□ -1.11
HPS4-218ENST00000519774 RIGQ13278 110 aa8.09□□□□□ -1.11
HPS4-218ENST00000519774 DNAH6Q9C0G6 4158 aa8.08□□□□□ -1.12
HPS4-218ENST00000519774 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
HPS4-218ENST00000519774 MT-ND4LP03901 98 aa8.08□□□□□ -1.12
HPS4-218ENST00000519774 RASL11AQ6T310 242 aa8.08□□□□□ -1.12
HPS4-218ENST00000519774 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.08□□□□□ -1.12
HPS4-218ENST00000519774 TNFRSF18Q9Y5U5 241 aa8.08□□□□□ -1.12
HPS4-218ENST00000519774 A0A087WWC5 75 aa8.07□□□□□ -1.12
HPS4-218ENST00000519774 C1orf134Q5TEV5 83 aa8.07□□□□□ -1.12
HPS4-218ENST00000519774 TMEM191AQ9H0A3 160 aa8.07□□□□□ -1.12
HPS4-218ENST00000519774 IGHV3-30P01768 117 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 IGHV3-33P01772 117 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 DNAH10OSP0CZ25 163 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 IGHV3-30-3P0DP02 117 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 IGHV3-30-5P0DP03 117 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 CAMPP49913 170 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
HPS4-218ENST00000519774 C6orf223Q8N319 242 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 GATD1Q8NB37 220 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 ANAPC16Q96DE5 110 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 DNAJC30Q96LL9 226 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 SEC11CQ9BY50 192 aa8.06□□□□□ -1.12
HPS4-218ENST00000519774 RTL8CO15255 209 aa8.05□□□□□ -1.12
HPS4-218ENST00000519774 DAZ4Q86SG3 579 aaKnown RBP8.05□□□□□ -1.12
HPS4-218ENST00000519774 AMN1Q8IY45 258 aa8.05□□□□□ -1.12
HPS4-218ENST00000519774 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
HPS4-218ENST00000519774 NIT2Q9NQR4 276 aa8.05□□□□□ -1.12
HPS4-218ENST00000519774 DAZ3Q9NR90 486 aaKnown RBP8.05□□□□□ -1.12
HPS4-218ENST00000519774 TRAV9-2A0A087WT02 112 aa8.04□□□□□ -1.12
HPS4-218ENST00000519774 HBBP68871 147 aa8.04□□□□□ -1.12
HPS4-218ENST00000519774 LINC01556Q5JQF7 62 aa8.04□□□□□ -1.12
HPS4-218ENST00000519774 Q8N3U1 123 aa8.04□□□□□ -1.12
HPS4-218ENST00000519774 DEFB104AQ8WTQ1 72 aa8.04□□□□□ -1.12
HPS4-218ENST00000519774 RNF185Q96GF1 192 aa8.04□□□□□ -1.12
HPS4-218ENST00000519774 TRBV6-8A0A0A6YYG3 113 aa8.03□□□□□ -1.12
HPS4-218ENST00000519774 A0A1B0GW15 77 aa8.03□□□□□ -1.12
HPS4-218ENST00000519774 EIF4EBP3O60516 100 aaPredicted RBP8.03□□□□□ -1.12
HPS4-218ENST00000519774 NCR2O95944 276 aa8.03□□□□□ -1.12
HPS4-218ENST00000519774 RAB4AP20338 218 aa8.03□□□□□ -1.12
HPS4-218ENST00000519774 TMEM97Q5BJF2 176 aa8.03□□□□□ -1.12
HPS4-218ENST00000519774 LINC00336Q6ZUF6 198 aa8.03□□□□□ -1.12
HPS4-218ENST00000519774 C10orf126Q8N4M7 172 aa8.03□□□□□ -1.12
HPS4-218ENST00000519774 A0A1B0GXF2 115 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 PRSS29PA6NIE9 313 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 SMKR1H3BMG3 65 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 GAS8-AS1O95177 125 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 S100A8P05109 93 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 KCNIP4Q6PIL6 250 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 NIT1Q86X76 327 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 FRZBQ92765 325 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 MRAP2Q96G30 205 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 CHCHD5Q9BSY4 110 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 URGCP-MRPS24S4R325 110 aa8.02□□□□□ -1.13
HPS4-218ENST00000519774 K7EP13 123 aa8.01□□□□□ -1.13
HPS4-218ENST00000519774 C10orf91Q5T1B1 145 aa8.01□□□□□ -1.13
HPS4-218ENST00000519774 FAM104BQ5XKR9 115 aa8.01□□□□□ -1.13
HPS4-218ENST00000519774 NTM-AS1Q6ZSK4 140 aa8.01□□□□□ -1.13
HPS4-218ENST00000519774 CTDSP1Q9GZU7 261 aa8.01□□□□□ -1.13
HPS4-218ENST00000519774 Q9HAA7 133 aa8.01□□□□□ -1.13
HPS4-218ENST00000519774 CARHSP1Q9Y2V2 147 aaKnown RBP8.01□□□□□ -1.13
HPS4-218ENST00000519774 TRBV25-1A0A075B6N4 114 aa8□□□□□ -1.13
HPS4-218ENST00000519774 A0A087WX48 190 aa8□□□□□ -1.13
HPS4-218ENST00000519774 IGHV1-24A0A0C4DH33 117 aa8□□□□□ -1.13
HPS4-218ENST00000519774 SDHAF1A6NFY7 115 aa8□□□□□ -1.13
HPS4-218ENST00000519774 TMEM262E9PQX1 116 aa8□□□□□ -1.13
HPS4-218ENST00000519774 RPS10P46783 165 aaKnown RBP8□□□□□ -1.13
HPS4-218ENST00000519774 COTL1Q14019 142 aa8□□□□□ -1.13
HPS4-218ENST00000519774 MRPL51Q4U2R6 128 aaKnown RBP8□□□□□ -1.13
HPS4-218ENST00000519774 ATP5L2Q7Z4Y8 100 aa8□□□□□ -1.13
HPS4-218ENST00000519774 ST20Q9HBF5 79 aa8□□□□□ -1.13
HPS4-218ENST00000519774 APOC3P02656 99 aa7.99□□□□□ -1.13
HPS4-218ENST00000519774 BTF3P20290 206 aaKnown RBP7.99□□□□□ -1.13
HPS4-218ENST00000519774 AMTP48728 403 aa7.99□□□□□ -1.13
HPS4-218ENST00000519774 GAGE6Q13070 117 aa7.99□□□□□ -1.13
HPS4-218ENST00000519774 IQCJQ1A5X6 159 aa7.99□□□□□ -1.13
HPS4-218ENST00000519774 CLRN3Q8NCR9 226 aa7.99□□□□□ -1.13
HPS4-218ENST00000519774 BTF3L4Q96K17 158 aa7.99□□□□□ -1.13
HPS4-218ENST00000519774 RPS10P5Q9NQ39 176 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms